Evidence map›Paper›PMID 33152759›Full record

ArticleBlood2021

Integrative genomic analysis of pediatric T-cell lymphoblastic lymphoma reveals candidates of clinical significance.

Tasneem Khanam, Sarah Sandmann, Jochen Seggewiss, Charlotte Ruether, Martin Zimmermann, Allison B Norvil, Christoph Bartenhagen, Gerrit Randau, Stephanie Mueller, Heidi Herbrueggen and 11 more

2 registry-linked trialsOpen access · bronzeAbstract read
In one paragraph

Article in Blood, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04043494 phase3recruitingnot on this map

LBL 2018 - International Cooperative Treatment Protocol for Children and Adolescents With Lymphoblastic Lymphoma

TypeinterventionalSponsorUniversity Hospital MuensterRan2019 to 2030Enrolled683ConditionsLymphoblastic Lymphoma, ChildhoodArmsCyclophosphamide, Cytarabine, Dexamethasone, Daunorubicin, Doxorubicin
NCT05681260 phase3recruitingnot on this mapstarted 2023, after this paper: background citation

A Randomized Trial Using a Modified COG ABFM Regimen Backbone to Investigate Capizzi Escalating Methotrexate Versus High Dose Methotrexate in Children With Newly Diagnosed T-cell Lymphoblastic Lymphoma (T-LBL)

TypeinterventionalSponsorChildren's Cancer Group, ChinaRan2023 to 2029Enrolled200ConditionsT-cell Lymphoblastic LymphomaArmsPrednisone,Vincristine, Pegylated-asparaginase, Bortezomib,Cytarabine, Cyclophosphamide, Daunorubicin, 6-mercaptopurine, methotrexate, Dexamethasone, Doxorubicin, Prednisone,Vincristine, Pegylated-asparaginase, Bortezomib,Cytarabine, Cyclophosphamide, Daunorubicin, 6-mercaptopurine, methotrexate, Dexamethasone, Doxorubicin, Vindesine, Etoposide, Ifosfamide
3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
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  14. International journal of biological sciences · 2024
    Article
  15. Integration of Genomic Sequencing Drives Therapeutic Targeting of PDGFRA in T-Cell Acute Lymphoblastic Leukemia/Lymphoblastic Lymphoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors at 8 institutions in 3 countries.

Tasneem KhanamDepartment of Paediatric Hematology and Oncology, University Hospital Muenster, Muenster, Germany.
Sarah SandmannInstitute of Medical Informatics and.
Jochen SeggewissInstitute of Human Genetics, Muenster University, Muenster, Germany.
Charlotte RuetherDepartment of Paediatric Hematology and Oncology, University Hospital Muenster, Muenster, Germany.
Martin ZimmermannDepartment of Pediatric Hematology and Oncology, Hannover Medical School, Hannover, Germany.
Allison B NorvilDepartment of Biochemistry, Purdue University, West Lafayette, IN.
Christoph BartenhagenInstitute of Medical Informatics and.
Gerrit RandauDepartment of Paediatric Hematology and Oncology, University Hospital Muenster, Muenster, Germany.
Stephanie MuellerDepartment of Paediatric Hematology and Oncology, University Hospital Muenster, Muenster, Germany.
Heidi HerbrueggenDepartment of Paediatric Hematology and Oncology, University Hospital Muenster, Muenster, Germany.
Per HoffmannInstitute of Human Genetics, Department of Genomics, Life and Brain Center, University of Bonn, Bonn, Germany.
Stefan HermsInstitute of Human Genetics, Department of Genomics, Life and Brain Center, University of Bonn, Bonn, Germany.
Lanying WeiInstitute of Medical Informatics and.
Marius WoesteInstitute of Medical Informatics and.
Christian WuenschInstitute of Medical Informatics and.
Humaira GowherDepartment of Biochemistry, Purdue University, West Lafayette, IN.
Ilske OschliesHematopathology Section, Department of Pathology, University Hospital Schleswig-Holstein Campus Kiel, Kiel, Germany; and.
Wolfram KlapperHematopathology Section, Department of Pathology, University Hospital Schleswig-Holstein Campus Kiel, Kiel, Germany; and.
Wilhelm WoessmannDepartment of Pediatric Hematology and Oncology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Martin DugasInstitute of Medical Informatics and.
Birgit BurkhardtDepartment of Paediatric Hematology and Oncology, University Hospital Muenster, Muenster, Germany.
University Hospital Münster · DEInstitute for Medical Informatics and Biostatistics · CHPurdue University West Lafayette · USUniversity Hospital Schleswig-Holstein · DEUniversity of Bonn · DEMedizinische Hochschule Hannover · DEUniversität Hamburg · DEUniversity Hospital Cologne · DE

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI Andrea L Kasinski · 1985 to 2026
$43.4M
Regulation of Dnmt3 Activity at Enhancers of Cell Identity Genes During DifferentiationR01GM118654 · NIGMS · PURDUE UNIVERSITY · PI GOWHER, HUMAIRA · 2017 to 2021
$1.6M
NCI NIH HHS P30 CA023168NIGMS NIH HHS R01 GM118654
6 · The paper itself

Abstract

T-cell lymphoblastic lymphoma (T-LBL) is a heterogeneous malignancy of lymphoblasts committed to T-cell lineage. The dismal outcomes (15%-30%) after T-LBL relapse warrant establishing risk-based treatment. To our knowledge, this study presents the first comprehensive, systematic, integrated, genome-wide analysis including relapsed cases that identifies molecular markers of prognostic relevance for T-LBL. NOTCH1 was identified as the putative driver for T-LBL. An activated NOTCH/PI3K-AKT signaling axis and alterations in cell cycle regulators constitute the core oncogenic program for T-LBL. Mutated KMT2D was identified as a prognostic marker. The cumulative incidence of relapse was 47% ± 17% in patients with KMT2D mutations, compared with 14% ± 3% in wild-type KMT2D. Structural analysis of the mutated domains of KMT2D revealed a plausible impact on structure and functional consequences. These findings provide new insights into the pathogenesis of T-LBL, including high translational potential. The ongoing LBL 2018 trial (www.clinicaltrials.gov #NCT04043494) allows for prospective validation and subsequent fine tuning of the stratification criteria for T-LBL risk groups to improve survival of pediatric patients.

Indexed as

AdolescentBiomarkers, TumorChildDNA-Binding ProteinsFemaleFollow-Up StudiesGene Expression Regulation, NeoplasticGenome, HumanGenomicsHumansMaleNeoplasm ProteinsPhosphatidylinositol 3-KinasesPrecursor T-Cell Lymphoblastic Leukemia-LymphomaPrognosisProto-Oncogene Proteins c-aktAKT1 protein, humanBiomarkers, TumorDNA-Binding ProteinsKMT2D protein, humanNeoplasm ProteinsNOTCH1 protein, humanPhosphatidylinositol 3-KinasesProto-Oncogene Proteins c-aktReceptor, Notch1

Identifiers

PMID33152759
PMCPMC8759350
OpenAlexW3097841381

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.