Evidence map›Paper›PMID 33152716›Full record

ArticlePhysics in medicine and biology2020

On the robustness of deep learning-based lung-nodule classification for CT images with respect to image noise.

Chenyang Shen, Min-Yu Tsai, Liyuan Chen, Shulong Li, Dan Nguyen, Jing Wang, Steve B Jiang, Xun Jia

Abstract read
In one paragraph

Article in Physics in medicine and biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. 3D axial-attention for lung nodule classification.International journal of computer assisted radiology and surgery · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chenyang ShenInnovative Technology Of Radiotherapy Computations and Hardware (iTORCH) Laboratory, Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.ORCID 0000-0001-6490-6555
Min-Yu TsaiInnovative Technology Of Radiotherapy Computations and Hardware (iTORCH) Laboratory, Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.
Liyuan ChenMedical Artificial Intelligence and Automation (MAIA) Laboratory, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.
Shulong LiMedical Artificial Intelligence and Automation (MAIA) Laboratory, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.
Dan NguyenMedical Artificial Intelligence and Automation (MAIA) Laboratory, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.ORCID 0000-0002-9590-0655
Jing WangMedical Artificial Intelligence and Automation (MAIA) Laboratory, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.ORCID 0000-0002-8491-4146
Steve B JiangMedical Artificial Intelligence and Automation (MAIA) Laboratory, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.
Xun JiaInnovative Technology Of Radiotherapy Computations and Hardware (iTORCH) Laboratory, Department of Radiation Oncology, University of Texas Southwestern Medical Center, Dallas, TX 75235, United States of America.

Funding

Next generation small animal radiation research platformR37CA214639 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI JIA, XUN · 2018 to 2024
$3.8M
Intelligent treatment planning for cancer radiotherapyR01CA237269 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI JIA, XUN, JIANG, STEVE BIN · 2019 to 2023
$2.5M
Precise image guidance for liver cancer stereotactic body radiotherapy using element-resolved motion-compensated cone beam CTR01CA227289 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI JIA, XUN · 2018 to 2022
$2.0M
NCI NIH HHS R01 CA227289NCI NIH HHS R01 CA237269NCI NIH HHS R37 CA214639
6 · The paper itself

Abstract

Robustness is an important aspect when evaluating a method of medical image analysis. In this study, we investigated the robustness of a deep learning (DL)-based lung-nodule classification model for CT images with respect to noise perturbations. A deep neural network (DNN) was established to classify 3D CT images of lung nodules into malignant or benign groups. The established DNN was able to predict malignancy rate of lung nodules based on CT images, achieving the area under the curve of 0.91 for the testing dataset in a tenfold cross validation as compared to radiologists' prediction. We then evaluated its robustness against noise perturbations. We added to the input CT images noise signals generated randomly or via an optimization scheme using a realistic noise model based on a noise power spectrum for a given mAs level, and monitored the DNN's output. The results showed that the CT noise was able to affect the prediction results of the established DNN model. With random noise perturbations at 100 mAs, DNN's predictions for 11.2% of training data and 17.4% of testing data were successfully altered by at least once. The percentage increased to 23.4% and 34.3%, respectively, for optimization-based perturbations. We further evaluated robustness of models with different architectures, parameters, number of output labels, etc, and robustness concern was found in these models to different degrees. To improve model robustness, we empirically proposed an adaptive training scheme. It fine-tuned the DNN model by including perturbations in the training dataset that successfully altered the DNN's perturbations. The adaptive scheme was repeatedly performed to gradually improve DNN's robustness. The numbers of perturbations at 100 mAs affecting DNN's predictions were reduced to 10.8% for training and 21.1% for testing by the adaptive training scheme after two iterations. Our study illustrated that robustness may potentially be a concern for an exemplary DL-based lung-nodule classification model for CT images, indicating the needs for evaluating and ensuring model robustness when developing similar models. The proposed adaptive training scheme may be able to improve model robustness.

Indexed as

Deep LearningTomography, X-Ray ComputedHumansImage Processing, Computer-AssistedLung Neoplasms

Identifiers

PMID33152716
PMCPMC7870572

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.