Evidence map›Paper›PMID 33152445›Full record

ArticleBrain, behavior, and immunity2021

PTSD is associated with increased DNA methylation across regions of HLA-DPB1 and SPATC1L.

Seyma Katrinli, Yuanchao Zheng, Aarti Gautam, Rasha Hammamieh, Ruoting Yang, Suresh Venkateswaran, Varun Kilaru, Adriana Lori, Rebecca Hinrichs, Abigail Powers and 13 more

Open access · greenAbstract read
In one paragraph

Article in Brain, behavior, and immunity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 5 institutions in 1 country.

Seyma KatrinliEmory University, Department of Gynecology and Obstetrics, Atlanta, GA, USA.
Yuanchao ZhengBoston University School of Public Health, Department of Biostatistics, Boston, MA, USA.
Aarti GautamMedical Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Rasha HammamiehMedical Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Ruoting YangMedical Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Suresh VenkateswaranEmory University School of Medicine Department of Pediatrics, Division of Pediatric Gastroenterology & Children's Healthcare of Atlanta, Atlanta, GA, USA.
Varun KilaruEmory University, Department of Gynecology and Obstetrics, Atlanta, GA, USA.
Adriana LoriEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA.
Rebecca HinrichsEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA.
Abigail PowersEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA.
Charles F GillespieEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA.
Aliza P WingoEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA; Division of Mental Health, Atlanta VA Medical Center, Decatur, GA, USA.
Vasiliki MichopoulosEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA.
Tanja JovanovicWayne State University, Department of Psychiatry & Behavioral Neurosciences, Detroit, MI, USA.
Erika J WolfNational Center for PTSD at VA Boston Healthcare System, Boston, MA, USA; Department of Psychiatry, Boston University School of Medicine, Boston, MA, USA.
Regina E McGlincheyGeriatric Research Educational and Clinical Center and Translational Research Center for TBI and Stress Disorders, Boston, USA; VA Boston Health Care System, MA, USA; Department of Psychiatry, Harvard Medical School, Boston, MA, USA.
William P MilbergGeriatric Research Educational and Clinical Center and Translational Research Center for TBI and Stress Disorders, Boston, USA; VA Boston Health Care System, MA, USA; Department of Psychiatry, Harvard Medical School, Boston, MA, USA.
Mark W MillerNational Center for PTSD at VA Boston Healthcare System, Boston, MA, USA; Department of Psychiatry, Boston University School of Medicine, Boston, MA, USA.
Subra KugathasanEmory University School of Medicine Department of Pediatrics, Division of Pediatric Gastroenterology & Children's Healthcare of Atlanta, Atlanta, GA, USA; Department of Human Genetics, Emory University, Atlanta, GA, USA.
Marti JettMedical Readiness Systems Biology, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Mark W LogueBoston University School of Public Health, Department of Biostatistics, Boston, MA, USA; National Center for PTSD at VA Boston Healthcare System, Boston, MA, USA; Department of Psychiatry, Boston University School of Medicine, Boston, MA, USA; Biomedical Genetics, Boston University School of Medicine, Boston, MA, USA.
Kerry J ResslerEmory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA; Department of Psychiatry, Harvard Medical School and McLean Hospital, Belmont, MA, USA.
Alicia K SmithEmory University, Department of Gynecology and Obstetrics, Atlanta, GA, USA; Emory University School of Medicine, Department of Psychiatry and Behavioral Sciences, Atlanta, GA, USA. Electronic address: alicia.smith@emory.edu.
Emory University · USBoston University · USWalter Reed Army Institute of Research · USMcLean Hospital · USWayne State University · US

Funding

Genetic and Trauma-Related Risk Factors for PTSDR01MH071537 · NIMH · EMORY UNIVERSITY · PI RESSLER, KERRY J. · 2005 to 2014
$8.5M
The Impact of Traumatic Stress on the Methylome: implications for PTSDR01MH108826 · NIMH · EMORY UNIVERSITY · PI LOGUE, MARK W, NIEVERGELT, CAROLINE M · 2016 to 2024
$5.8M
Genetic and estrogen-dependent regulation of the human PAC1R receptor and PTSDR01MH096764 · NIMH · MCLEAN HOSPITAL · PI RESSLER, KERRY J. · 2012 to 2016
$2.1M
4/7 Psychiatric Genomics Consortium: Advancing Discovery and ImpactR01MH124847 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIEVERGELT, CAROLINE M, SEBAT, JONATHAN · 2021 to 2025
$2.1M
Neuroimaging Genetics of PTSDR21MH102834 · NIMH · BOSTON UNIVERSITY MEDICAL CAMPUS · PI MILLER, MARK W · 2014 to 2015
$355k
Neurobiological Correlates of Accelerated Cellular AgingR21AG061367 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WOLF, ERIKA J · 2019 to 2020
$347k
Traumatic Stress and Accelerated Aging in DNA MethylationR03AG051877 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI WOLF, ERIKA J · 2016 to 2017
$179k
Genetic and Trauma-Related Risk Factors for PTSD: From GWAS to FunctionR56MH071537 · NIMH · EMORY UNIVERSITY · PI RESSLER, KERRY J. · 2015 to 2015
$148k
PTSD-Related Accelerated Aging in DNA Methylation and Risk for Metabolic SyndromeI01CX001276 · VA · VA BOSTON HEALTH CARE SYSTEM · PI WOLF, ERIKA J · 2016 to 2021
–
Genetic and Epigenetic Biomarkers of PTSDI01BX003477 · VA · VA BOSTON HEALTH CARE SYSTEM · PI LOGUE, MARK W · 2017 to 2020
–
BLRD VA I01 BX003477CSRD VA I01 CX001276NIA NIH HHS R03 AG051877NIA NIH HHS R21 AG061367NIMH NIH HHS R01 MH071537NIMH NIH HHS R01 MH096764NIMH NIH HHS R01 MH108826NIMH NIH HHS R01 MH124847NIMH NIH HHS R21 MH102834NIMH NIH HHS R56 MH071537
6 · The paper itself

Abstract

Posttraumatic stress disorder (PTSD) is characterized by intrusive thoughts, avoidance, negative alterations in cognitions and mood, and arousal symptoms that adversely affect mental and physical health. Recent evidence links changes in DNA methylation of CpG cites to PTSD. Since clusters of proximal CpGs share similar methylation signatures, identification of PTSD-associated differentially methylated regions (DMRs) may elucidate the pathways defining differential risk and resilience of PTSD. Here we aimed to identify epigenetic differences associated with PTSD. DNA methylation data profiled from blood samples using the MethylationEPIC BeadChip were used to perform a DMR analysis in 187 PTSD cases and 367 trauma-exposed controls from the Grady Trauma Project (GTP). DMRs were assessed with R package bumphunter. We identified two regions that associate with PTSD after multiple test correction. These regions were in the gene body of HLA-DPB1 and in the promoter of SPATC1L. The DMR in HLA-DPB1 was associated with PTSD in an independent cohort. Both DMRs included CpGs whose methylation associated with nearby sequence variation (meQTL) and that associated with expression of their respective genes (eQTM). This study supports an emerging literature linking PTSD risk to genetic and epigenetic variation in the HLA region.

Indexed as

DNA MethylationStress Disorders, Post-TraumaticCytoskeletal ProteinsEpigenesis, GeneticEpigenomicsHLA-DP beta-ChainsHumansCytoskeletal ProteinsHLA-DPB1 antigenHLA-DP beta-ChainsSPATC1L protein, humanDNA methylationEpigeneticseQTMEWASmeQTL

Identifiers

PMID33152445
PMCPMC7749859
OpenAlexW3096181158

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.