Evidence map›Paper›PMID 33150652›Full record

ArticleJournal of environmental quality2020

Modeling the photoinactivation and transport of somatic and F-specific coliphages at a Great Lakes beach.

Ammar Safaie, Chelsea J Weiskerger, Tuan D Nguyen, Brad Acrey, Richard G Zepp, Marirosa Molina, Michael Cyterski, Gene Whelan, Yakov A Pachepsky, Mantha S Phanikumar

Open access · greenAbstract read
In one paragraph

Article in Journal of environmental quality, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Fate and transport in environmental quality.Journal of environmental quality · 2021
    Article
  3. Environmental effects of stratospheric ozone depletion, UV radiation, and interactions with climate change: UNEP Environmental Effects Assessment Panel, Update 2020.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Ammar SafaieDep. of Civil & Environmental Engineering, Michigan State Univ., East Lansing, MI, 48824, USA.
Chelsea J WeiskergerDep. of Civil & Environmental Engineering, Michigan State Univ., East Lansing, MI, 48824, USA.
Tuan D NguyenDep. of Civil & Environmental Engineering, Michigan State Univ., East Lansing, MI, 48824, USA.
Brad AcreyOffice of Research and Development, National Exposure Research Lab., U.S. Environmental Protection Agency, Athens, GA, 30605, USA.
Richard G ZeppOffice of Research and Development, National Exposure Research Lab., U.S. Environmental Protection Agency, Athens, GA, 30605, USA.
Marirosa MolinaOffice of Research and Development, National Exposure Research Lab., U.S. Environmental Protection Agency, Athens, GA, 30605, USA.ORCID https://orcid.org/0000-0002-6373-8374
Michael CyterskiOffice of Research and Development, National Exposure Research Lab., U.S. Environmental Protection Agency, Athens, GA, 30605, USA.
Gene WhelanOffice of Research and Development, National Exposure Research Lab., U.S. Environmental Protection Agency, Athens, GA, 30605, USA.
Yakov A PachepskyUSDA-ARS, Environmental Microbial and Food Safety Lab., Beltsville, MD, 20705, USA.ORCID https://orcid.org/0000-0003-0232-6090
Mantha S PhanikumarDep. of Civil & Environmental Engineering, Michigan State Univ., East Lansing, MI, 48824, USA.ORCID https://orcid.org/0000-0001-9206-3129
Environmental Protection Agency · USMichigan State University · USAgricultural Research Service · USRural Development Agency · LA

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

Fecal indicator organisms (FIOs), such as Escherichia coli and enterococci, are often used as surrogates of contamination in the context of beach management; however, bacteriophages may be more reliable indicators than FIO due to their similarity to viral pathogens in terms of size and persistence in the environment. In the past, mechanistic modeling of environmental contamination has focused on FIOs, with virus and bacteriophage modeling efforts remaining limited. In this paper, we describe the development and application of a fate and transport model of somatic and F-specific coliphages for the Washington Park beach in Lake Michigan, which is affected by riverine outputs from the nearby Trail Creek. A three-dimensional model of coliphage transport and photoinactivation was tested and compared with a previously reported E. coli fate and transport model. The light-based inactivation of the phages was modeled using organism-specific action spectra. Results indicate that the coliphage models outperformed the E. coli model in terms of reliably predicting observed E. coli/coliphage concentrations at the beach. This is possibly due to the presence of additional E. coli sources that were not accounted for in the modeling. The coliphage models can be used to test hypotheses about potential sources and their behavior and for predictive modeling.

Indexed as

LakesWater MicrobiologyColiphagesEnterococcusEscherichia coliFeces

Identifiers

PMID33150652
PMCPMC7859910
OpenAlexW3087671015

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.