Evidence map›Paper›PMID 33146722›Full record

ArticleThe Journal of infectious diseases2021

Changing Prevalence of Potential Mediators of Aminoquinoline, Antifolate, and Artemisinin Resistance Across Uganda.

Victor Asua, Melissa D Conrad, Ozkan Aydemir, Marvin Duvalsaint, Jennifer Legac, Elias Duarte, Patrick Tumwebaze, Deborah M Chin, Roland A Cooper, Adoke Yeka and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
134citing papers in PubMed, 2 pooled it
23.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

134 citing papers in PubMed, 2 syntheses or guidelines pooled it, 222 citations in OpenAlex.

  1. Pooled it
  2. Mapping Antimalarial Drug Resistance in Mozambique: A Systematic Review ofInternational journal of molecular sciences · 2024
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74 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Victor AsuaInfectious Diseases Research Collaboration, Kampala, Uganda.
Melissa D ConradUniversity of California, San Francisco, San Francisco, California, USA.
Ozkan AydemirBrown University, Providence, Rhode Island, USA.
Marvin DuvalsaintUniversity of California, San Francisco, San Francisco, California, USA.
Jennifer LegacUniversity of California, San Francisco, San Francisco, California, USA.
Elias DuarteUniversity of California, San Francisco, San Francisco, California, USA.
Patrick TumwebazeInfectious Diseases Research Collaboration, Kampala, Uganda.
Deborah M ChinBrown University, Providence, Rhode Island, USA.
Roland A CooperDominican University of California, San Rafael, California, USA.
Adoke YekaInfectious Diseases Research Collaboration, Kampala, Uganda.
Moses R KamyaInfectious Diseases Research Collaboration, Kampala, Uganda.
Grant DorseyUniversity of California, San Francisco, San Francisco, California, USA.
Sam L NsobyaInfectious Diseases Research Collaboration, Kampala, Uganda.
Jeffrey BaileyBrown University, Providence, Rhode Island, USA.
Philip J RosenthalUniversity of California, San Francisco, San Francisco, California, USA.
University of California, San Francisco · USInfectious Diseases Research Collaboration · UGBrown University · USDominican University of California · US

Funding

Transmission ProjectU19AI089674 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joaniter Immaculate Nankabirwa · 2010 to 2026
$29.3M
Resistance of Malaria Parasites to Artemisinin-Based TherapiesR01AI075045 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ROSENTHAL, PHILIP JON · 2009 to 2024
$8.4M
Microbial Pathogenesis and Host DefenseT32AI060537 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Joanne N. Engel · 2004 to 2026
$6.5M
Tracking the flow of malaria parasites and drug resistance within the DRC and across its bordersR01AI139520 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BAILEY, JEFFREY A. · 2018 to 2023
$3.6M
The impact of antimalarials and insecticide resistance on malaria transmission in UgandaK01TW010868 · FIC · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CONRAD, MELISSA D · 2018 to 2022
$706k
FIC NIH HHS K01 TW010868NIAID NIH HHS R01 AI075045NIAID NIH HHS R01 AI139520NIAID NIH HHS T32 AI060537NIAID NIH HHS U19 AI089674
6 · The paper itself

Abstract

backgroundIn Uganda, artemether-lumefantrine is recommended for malaria treatment and sulfadoxine-pyrimethamine for chemoprevention during pregnancy, but drug resistance may limit efficacies.

methodsGenetic polymorphisms associated with sensitivities to key drugs were characterized in samples collected from 16 sites across Uganda in 2018 and 2019 by ligase detection reaction fluorescent microsphere, molecular inversion probe, dideoxy sequencing, and quantitative polymerase chain reaction assays.

resultsConsidering transporter polymorphisms associated with resistance to aminoquinolines, the prevalence of Plasmodium falciparum chloroquine resistance transporter (PfCRT) 76T decreased, but varied markedly between sites (0-46% in 2018; 0-23% in 2019); additional PfCRT polymorphisms and plasmepsin-2/3 amplifications associated elsewhere with resistance to piperaquine were not seen. For P. falciparum multidrug resistance protein 1, in 2019 the 86Y mutation was absent at all sites, the 1246Y mutation had prevalence ≤20% at 14 of 16 sites, and gene amplification was not seen. Considering mutations associated with high-level sulfadoxine-pyrimethamine resistance, prevalences of P. falciparum dihydrofolate reductase 164L (up to 80%) and dihydropteroate synthase 581G (up to 67%) were high at multiple sites. Considering P. falciparum kelch protein propeller domain mutations associated with artemisinin delayed clearance, prevalence of the 469Y and 675V mutations has increased at multiple sites in northern Uganda (up to 23% and 41%, respectively).

conclusionsWe demonstrate concerning spread of mutations that may limit efficacies of key antimalarial drugs.

Indexed as

AminoquinolinesAntimalarialsArtemisininsDrug ResistanceFolic Acid AntagonistsFemaleHumansMalaria, FalciparumPlasmodium falciparumPregnancyPrevalenceUgandaAminoquinolinesAntimalarialsArtemisininsFolic Acid Antagonistsdrug resistancePfCRTPfDHFRPfDHPSPfK13PfMDR1Plasmodium falciparumUganda

Identifiers

PMID33146722
PMCPMC8006419
OpenAlexW3095596738

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.