Evidence map›Paper›PMID 33146700›Full record

ArticleBioscience reports2020

Bioinformatics identification of CCL8/21 as potential prognostic biomarkers in breast cancer microenvironment.

Bowen Chen, Shuyuan Zhang, Qiuyu Li, Shiting Wu, Han He, Jinbo Huang

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Bowen Chen *Department of Breast Disease, Maoming People's Hospital, Maoming 525000, China.
Shuyuan Zhang *Department of Clinical Laboratory, Maoming People's Hospital, Maoming 525000, China.
Qiuyu LiDepartment of Emergency, Maoming People's Hospital, Maoming 525000, China.
Shiting WuDepartment of Oncology, Maoming People's Hospital, Maoming 525000, China.
Han HeDepartment of Medical Imaging, Maoming People's Hospital, Maoming 525000, China.
Jinbo HuangDepartment of Breast Disease, Maoming People's Hospital, Maoming 525000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBreast cancer (BC) is the most common malignancy among females worldwide. The tumor microenvironment usually prevents effective lymphocyte activation and infiltration, and suppresses infiltrating effector cells, leading to a failure of the host to reject the tumor. CC chemokines play a significant role in inflammation and infection.

methodsIn our study, we analyzed the expression and survival data of CC chemokines in patients with BC using several bioinformatics analyses tools.

resultsThe mRNA expression of CCL2/3/4/5/7/8/11/17/19/20/22 was remarkably increased while CCL14/21/23/28 was significantly down-regulated in BC tissues compared with normal tissues. Methylation could down-regulate expression of CCL2/5/15/17/19/20/22/23/24/25/26/27 in BC. Low expression of CCL3/4/23 was found to be associated with drug resistance in BC. Results from Kaplan-Meier plotter and BC Gene-Expression Miner v4.2 (bcGenExMiner) v4.2 demonstrated that BC patients with high CCL8 and low CCL19/21/22 expression were more likely to have a worse prognosis. CCL8 expression was significantly up-regulated in BC tissues compared with normal tissues. High CCL8 expression was significantly correlated with negative PR, negative ER, positive nodal status, triple-negative BC subtype, basal-like BC subtype, triple-negative and basal-like BC subtype and high grades. CCL21 was down-regulated in BC, while high levels of CCL21 was associated with negative PR, triple-negative subtype, basal-like subtype and low tumor grade. Functional analysis demonstrated that CCL8 and CCL21 were involved in carcinogenesis, tumor immune escape and chemoresistance in BC.

conclusionIntegrative bioinformatics analysis demonstrated CCL8/21 as potential prognostic biomarkers in BC microenvironment.

Indexed as

TranscriptomeTumor MicroenvironmentBiomarkers, TumorBreast NeoplasmsChemokine CCL21Chemokine CCL8Databases, GeneticDNA MethylationDrug Resistance, NeoplasmFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansPrognosisProtein Interaction MapsBiomarkers, TumorCCL21 protein, humanCCL8 protein, humanChemokine CCL21Chemokine CCL8biomarkerbreast cancerCCL21CCL8tumor microenvironments

Identifiers

PMID33146700
PMCPMC7687043
OpenAlexW3096404552

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.