Evidence map›Paper›PMID 33146609›Full record

ArticleeLife2020

Reconstruction of natural images from responses of primate retinal ganglion cells.

Nora Brackbill, Colleen Rhoades, Alexandra Kling, Nishal P Shah, Alexander Sher, Alan M Litke, E J Chichilnisky

Abstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
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  13. Inference of Electrical Stimulation Sensitivity from Recorded Activity of Primate Retinal Ganglion Cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  14. High-Fidelity Reproduction of Visual Signals by Electrical Stimulation in the Central Primate Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  15. Learning low-dimensional generalizable natural features from retina using a U-net.Advances in neural information processing systems · 2022
    Article
  16. Article
  17. Article
  18. Encoding Taste: From Receptors to Perception.Handbook of experimental pharmacology · 2022
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Nora BrackbillDepartment of Physics, Stanford University, Stanford, United States.ORCID 0000-0002-0308-1382
Colleen RhoadesDepartment of Bioengineering, Stanford University, Stanford, United States.
Alexandra KlingDepartment of Neurosurgery, Stanford School of Medicine, Stanford, United States.
Nishal P ShahDepartment of Electrical Engineering, Stanford University, Stanford, United States.ORCID 0000-0002-1275-0381
Alexander SherSanta Cruz Institute for Particle Physics, University of California, Santa Cruz, Santa Cruz, United States.
Alan M LitkeSanta Cruz Institute for Particle Physics, University of California, Santa Cruz, Santa Cruz, United States.ORCID 0000-0003-3973-3642
E J ChichilniskyDepartment of Neurosurgery, Stanford School of Medicine, Stanford, United States.ORCID 0000-0002-5613-0248

Funding

Unique physiological properties of novel ganglion cell types in primate retinaR01EY029247 · NEI · STANFORD UNIVERSITY · PI EDUARDO CHICHILNISKY, Michael B Manookin · 2018 to 2026
$4.7M
Receptive Field Mosaics of Midget, Parasol and Small Bi-Stratified Ganglion CellsR01EY017992 · NEI · STANFORD UNIVERSITY · PI CHICHILNISKY, EDUARDO · 2007 to 2014
$3.2M
Characterizing Low-Density Ganglion Cells in the Primate RetinaF31EY027166 · NEI · STANFORD UNIVERSITY · PI RHOADES, COLLEEN · 2016 to 2019
$96k
National Science Foundation GRFP DGE-114747National Science Foundation IGERT 0801700National Science Foundation IIS-1430348NEI NIH HHS F31 EY027166NEI NIH HHS F31EY027166NEI NIH HHS R01 EY017992NEI NIH HHS R01 EY029247NIH HHS IIS-1430348
6 · The paper itself

Abstract

The visual message conveyed by a retinal ganglion cell (RGC) is often summarized by its spatial receptive field, but in principle also depends on the responses of other RGCs and natural image statistics. This possibility was explored by linear reconstruction of natural images from responses of the four numerically-dominant macaque RGC types. Reconstructions were highly consistent across retinas. The optimal reconstruction filter for each RGC - its visual message - reflected natural image statistics, and resembled the receptive field only when nearby, same-type cells were included. ON and OFF cells conveyed largely independent, complementary representations, and parasol and midget cells conveyed distinct features. Correlated activity and nonlinearities had statistically significant but minor effects on reconstruction. Simulated reconstructions, using linear-nonlinear cascade models of RGC light responses that incorporated measured spatial properties and nonlinearities, produced similar results. Spatiotemporal reconstructions exhibited similar spatial properties, suggesting that the results are relevant for natural vision.

Indexed as

AnimalsMacaca fascicularisMacaca mulattaMicroelectrodesPhotic StimulationRetinaRetinal Ganglion CellsVision, Oculardecodingmacaca fascicularisnatural imagesneurosciencereconstructionretinaretinal ganglion cellsrhesus macaque

Identifiers

PMID33146609
PMCPMC7752138

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.