Evidence map›Paper›PMID 33145876›Full record

ArticleMolecular oncology2021

Discovery of novel DNA methylation biomarkers for non-invasive sporadic breast cancer detection in the Latino population.

Mónica Cappetta, Lucía Fernandez, Lucía Brignoni, Nora Artagaveytia, Carolina Bonilla, Miguel López, Manel Esteller, Bernardo Bertoni, María Berdasco

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Mónica CappettaDepartamento de Genética, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.ORCID 0000-0003-2015-0156
Lucía FernandezDepartamento de Genética, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Lucía BrignoniDepartamento de Genética, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Nora ArtagaveytiaDepartamento Básico de Medicina, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
Carolina BonillaDepartamento de Medicina Preventiva, Facultad de Medicina, Universidad de São Paulo, Brazil.
Miguel LópezCancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.
Manel EstellerCancer Epigenetics Group, Cancer and Leukemia Epigenetics and Biology Program (PEBCL), Josep Carreras Leukaemia Research Institute (IJC), Badalona, Spain.ORCID 0000-0003-4490-6093
Bernardo BertoniDepartamento de Genética, Facultad de Medicina, Universidad de la República, Montevideo, Uruguay.
María BerdascoCancer Epigenetics and Biology Program (PEBC), Bellvitge Biomedical Research Institute (IDIBELL), Barcelona, Spain.ORCID 0000-0002-6750-0400
Universidad de la República de Uruguay · UYInstitut d'Investigació Biomédica de Bellvitge · ESInstitució Catalana de Recerca i Estudis Avançats · ESUniversidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human diversity is one of the main pitfalls in the development of robust worldwide biomarkers in oncology. Epigenetic variability across human populations is associated with different genetic backgrounds, as well as variable lifestyles and environmental exposures, each of which should be investigated. To identify potential non-invasive biomarkers of sporadic breast cancer in the Uruguayan population, we studied genome-wide DNA methylation using Illumina methylation arrays in leukocytes of 22 women with sporadic breast cancer and 10 healthy women in a case-control study. We described a panel of 38 differentially methylated CpG positions that was able to cluster breast cancer patients (BCP) and controls, and that also recapitulated methylation differences in 12 primary breast tumors and their matched normal breast tissue. Moving forward, we simplified the detection method to improve its applicability in a clinical setting and used an independent well-characterized cohort of 80 leukocyte DNA samples from BCP and 80 healthy controls to validate methylation results at specific cancer-related genes. Our investigations identified methylation at CYFIP1 as a novel epigenetic biomarker candidate for sporadic breast cancer in the Uruguayan population. These results provide a proof-of-concept for the design of larger studies aimed at validating biomarker panels for the Latin American population.

Indexed as

Biomarkers, TumorBreast NeoplasmsDatabases, Nucleic AcidDNA MethylationDNA, NeoplasmHispanic or LatinoCase-Control StudiesDisease-Free SurvivalFemaleHumansSurvival RateUnited StatesBiomarkers, TumorDNA, Neoplasmbiomarkerbreast cancerDNA methylationhuman diversitynon-invasive test

Identifiers

PMID33145876
PMCPMC7858097
OpenAlexW3095435679

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.