Evidence map›Paper›PMID 33144563›Full record

ArticleNature communications2020

BrainPhys neuronal medium optimized for imaging and optogenetics in vitro.

Michael Zabolocki, Kasandra McCormack, Mark van den Hurk, Bridget Milky, Andrew P Shoubridge, Robert Adams, Jenne Tran, Anita Mahadevan-Jansen, Philipp Reineck, Jacob Thomas and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
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  7. Leveraging AI for cell biology discovery.Biochemical Society transactions · 2026
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Human iPSC-Derived Neurons with Reliable Synapses and Large Presynaptic Action Potentials.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  15. Review
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Michael ZabolockiLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.
Kasandra McCormackSTEMCELL Technologies, Vancouver, Canada.
Mark van den HurkLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.ORCID http://orcid.org/0000-0002-9971-2547
Bridget MilkyLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.
Andrew P ShoubridgeLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.
Robert AdamsLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.ORCID http://orcid.org/0000-0001-6254-0385
Jenne TranLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia.
Anita Mahadevan-JansenVanderbilt Biophotonics Centre, Vanderbilt University, Nashville, USA.
Philipp ReineckARC Centre of Excellence for Nanoscale BioPhotonics & School of Science, RMIT University, Melbourne, VIC, Australia.ORCID http://orcid.org/0000-0003-1549-937X
Jacob ThomasAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.
Mark R HutchinsonAdelaide Medical School, University of Adelaide, Adelaide, SA, Australia.ORCID http://orcid.org/0000-0003-2154-5950
Carmen K H MakSTEMCELL Technologies, Vancouver, Canada.ORCID http://orcid.org/0000-0003-2991-5899
Adam AñonuevoSTEMCELL Technologies, Vancouver, Canada.
Leon H ChewSTEMCELL Technologies, Vancouver, Canada.
Adam J HirstSTEMCELL Technologies, Vancouver, Canada.
Vivian M LeeSTEMCELL Technologies, Vancouver, Canada.
Erin KnockSTEMCELL Technologies, Vancouver, Canada.
Cedric BardyLaboratory for Human Neurophysiology and Genetics, South Australian Health and Medical Research Institute (SAHMRI), Adelaide, SA, Australia. cedric.bardy@sahmri.com.ORCID http://orcid.org/0000-0001-8321-0852

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The capabilities of imaging technologies, fluorescent sensors, and optogenetics tools for cell biology are advancing. In parallel, cellular reprogramming and organoid engineering are expanding the use of human neuronal models in vitro. This creates an increasing need for tissue culture conditions better adapted to live-cell imaging. Here, we identify multiple caveats of traditional media when used for live imaging and functional assays on neuronal cultures (i.e., suboptimal fluorescence signals, phototoxicity, and unphysiological neuronal activity). To overcome these issues, we develop a neuromedium called BrainPhys™ Imaging (BPI) in which we optimize the concentrations of fluorescent and phototoxic compounds. BPI is based on the formulation of the original BrainPhys medium. We benchmark available neuronal media and show that BPI enhances fluorescence signals, reduces phototoxicity and optimally supports the electrical and synaptic activity of neurons in culture. We also show the superior capacity of BPI for optogenetics and calcium imaging of human neurons. Altogether, our study shows that BPI improves the quality of a wide range of fluorescence imaging applications with live neurons in vitro while supporting optimal neuronal viability and function.

Indexed as

Diagnostic ImagingOptogeneticsAction PotentialsAnimalsBrainCells, CulturedCell SurvivalCerebrospinal FluidCulture MediaFluorescenceHumansInduced Pluripotent Stem CellsLightNerve NetNeuronsOsmolar ConcentrationCulture Media

Identifiers

PMID33144563
PMCPMC7642238

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.