Evidence map›Paper›PMID 33141462›Full record

ArticleJournal of neuroscience research2021

An epilepsy-associated ACTL6B variant captures neuronal hyperexcitability in a human induced pluripotent stem cell model.

Lucie Y Ahn, Giuliana C Coatti, Jingyi Liu, Evren Gumus, Ashleigh E Schaffer, Helen C Miranda

Open access · hybridAbstract read
In one paragraph

Article in Journal of neuroscience research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 10 citations in OpenAlex.

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  10. [A review on the genetic mechanism of chromatin remodeling in children with neurodevelopmental disorders].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lucie Y AhnDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH, USA.
Giuliana C CoattiDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH, USA.ORCID 0000-0001-8140-8400
Jingyi LiuDepartment of Pathology, Case Western Reserve University, Cleveland, OH, USA.ORCID 0000-0002-8079-655X
Evren GumusDepartment of Medical Genetics, Faculty of Medicine, Mugla Sitki Kocman University, Mugla, Turkey.
Ashleigh E SchafferDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH, USA.ORCID 0000-0002-1164-697X
Helen C MirandaDepartment of Genetics and Genome Sciences, Case Western Reserve University, Cleveland, OH, USA.ORCID 0000-0002-4064-9790
Case Western Reserve University · USMuğla University · TR

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
Study of AR transcriptional network in stem cell model of SBMAR01NS121374 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI MIRANDA, HELEN C · 2021 to 2025
$2.0M
Functional Genomics Training Program (FGTP)T32GM135081 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI Thomas Louis LaFramboise, Helen C Miranda · 2020 to 2026
$1.3M
Study of SBMA mutant AR transcriptional network in stem cell-derived motor neurons and skeletal muscleK01NS116119 · NINDS · CASE WESTERN RESERVE UNIVERSITY · PI MIRANDA, HELEN C · 2020 to 2024
$832k
Molecular Mechanisms of Intellectual DisabilityR00HD082337 · NICHD · CASE WESTERN RESERVE UNIVERSITY · PI SCHAFFER, ASHLEIGH E · 2017 to 2019
$662k
National Institute of Child Health and Human Development R00HD082337NICHD NIH HHS R00 HD082337NIGMS NIH HHS T32 GM007250NIGMS NIH HHS T32 GM135081NINDS NIH HHS K01 NS116119NINDS NIH HHS K01NS116119NINDS NIH HHS R01 NS121374
6 · The paper itself

Abstract

ACTL6B is a component of the neuronal BRG1/brm-associated factor (nBAF) complex, which is required for chromatin remodeling in postmitotic neurons. We recently reported biallelic pathogenic variants in ACTL6B in patients diagnosed with early infantile epileptic encephalopathy, subtype 76 (EIEE-76), presenting with severe, global developmental delay, epileptic encephalopathy, cerebral atrophy, and abnormal central nervous system myelination. However, the pathophysiological mechanisms underlying their phenotype is unknown. Here, we investigate the molecular pathogenesis of ACTL6B p.(Val421_Cys425del) using in silico 3D protein modeling predictions and patient-specific induced pluripotent stem cell-derived neurons. We found neurons derived from EIEE-76 patients showed impaired accumulation of ACTL6B compared to unaffected relatives, caused by reduced protein stability. Furthermore, EIEE-76 patient-derived neurons had dysregulated nBAF target gene expression, including genes important for neuronal development and disease. Multielectrode array system analysis unveiled elevated electrophysiological activity of EIEE-76 patients-derived neurons, consistent with the patient phenotype. Taken together, our findings validate a new model for EIEE-76 and reveal how reduced ACTL6B expression affects neuronal function.

Indexed as

Models, MolecularActinsCell DifferentiationCellular ReprogrammingChromosomal Proteins, Non-HistoneDNA-Binding ProteinsHumansInduced Pluripotent Stem CellsMutationNeuronsProtein StabilitySpasms, InfantileActinsACTL6B protein, humanChromosomal Proteins, Non-HistoneDNA-Binding Proteinschromatin assembly and disassemblyinduced pluripotent stem cellsinfantile epileptic encephalopathyRRID:AB_10691311RRID:AB_10954442RRID:AB_11219471RRID:AB_138404RRID:AB_141778RRID:AB_1642229RRID:AB_2138153RRID:AB_2210524RRID:AB_2313773RRID:AB_2534096RRID:AB_2535792RRID:AB_2535805RRID:AB_2536381RRID:AB_2536527RRID:AB_2536821RRID:AB_2565003RRID:AB_2576217RRID:AB_266547RRID:AB_2819160RRID:AB_2857952RRID:AB_304558RRID:AB_621847RRID:Addgene_27077RRID:Addgene_27078RRID:Addgene_27080RRID:Addgene_37624RRID:SCR_002380RRID:SCR_002798RRID:SCR_013295RRID:SCR_013715RRID:SCR_016308SC29312

Identifiers

PMID33141462
PMCPMC7756336
OpenAlexW3097399001

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.