Evidence map›Paper›PMID 33140917›Full record

ArticleEMBO reports2020

Single-cell transcriptome analysis reveals thyrocyte diversity in the zebrafish thyroid gland.

Pierre Gillotay, Meghna Shankar, Benoit Haerlingen, Eski Sema Elif, Macarena Pozo-Morales, Inés Garteizgogeascoa, Susanne Reinhardt, Annekathrin Kränkel, Juliane Bläsche, Andreas Petzold and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 45 citations in OpenAlex.

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  9. Experimentally Manipulating the Thyroid Hormone Axis in Zebrafish.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  10. Article
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  13. Review
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  18. Article
  19. Modeling Human Thyroid Development by Fetal Tissue-Derived Organoid Culture.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2022
    Article
  20. Cryo-EM: A new dawn in thyroid biology.Molecular and cellular endocrinology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 2 countries.

Pierre GillotayIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.
Meghna ShankarIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.
Benoit HaerlingenIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.
Eski Sema ElifIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.ORCID 0000-0002-4757-8614
Macarena Pozo-MoralesIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.
Inés GarteizgogeascoaIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.ORCID 0000-0003-1886-9292
Susanne ReinhardtDRESDEN-concept Genome Center, DFG NGS Competence Center, c/o Center for Molecular and Cellular Bioengineering, TU Dresden, Dresden, Germany.
Annekathrin KränkelDRESDEN-concept Genome Center, DFG NGS Competence Center, c/o Center for Molecular and Cellular Bioengineering, TU Dresden, Dresden, Germany.
Juliane BläscheDRESDEN-concept Genome Center, DFG NGS Competence Center, c/o Center for Molecular and Cellular Bioengineering, TU Dresden, Dresden, Germany.
Andreas PetzoldDRESDEN-concept Genome Center, DFG NGS Competence Center, c/o Center for Molecular and Cellular Bioengineering, TU Dresden, Dresden, Germany.
Nikolay NinovCenter for Regenerative Therapies Dresden (CRTD), TU Dresden, Dresden, Germany.
Gokul KesavanCenter for Regenerative Therapies Dresden TU Dresden (CRTD), and Cluster of Excellence, Physics of Life (PoL), TU Dresden, Dresden, Germany.
Christian LangeCenter for Regenerative Therapies Dresden TU Dresden (CRTD), and Cluster of Excellence, Physics of Life (PoL), TU Dresden, Dresden, Germany.
Michael BrandCenter for Regenerative Therapies Dresden TU Dresden (CRTD), and Cluster of Excellence, Physics of Life (PoL), TU Dresden, Dresden, Germany.
Anne LefortCenter for Regenerative Therapies Dresden TU Dresden (CRTD), and Cluster of Excellence, Physics of Life (PoL), TU Dresden, Dresden, Germany.
Frédérick LibertCenter for Regenerative Therapies Dresden TU Dresden (CRTD), and Cluster of Excellence, Physics of Life (PoL), TU Dresden, Dresden, Germany.
Vincent DetoursIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.
Sabine CostagliolaIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.ORCID 0000-0002-6869-9941
Singh Sumeet PalIRIBHM, Université Libre de Bruxelles (ULB), Brussels, Belgium.ORCID 0000-0002-5154-3318
Université Libre de Bruxelles · BETechnische Universität Dresden · DECenter for Systems Biology Dresden · DE

Funding

Deutsche Forschungsgemeinschaft (DFG)EC|H2020 | H2020 Priority Excellent Science | H2020 European Research Council (ERC)FNRS|Fonds pour la Formation à la Recherche dans l'Industrie et dans l'Agriculture (FRIA)Fond Naets J1813300Fonds De La Recherche Scientifique - FNRS (FNRS) 34772792Fonds De La Recherche Scientifique - FNRS (FNRS) 34985615Fonds De La Recherche Scientifique - FNRS (FNRS) CDR-J.0145.16Fonds De La Recherche Scientifique - FNRS (FNRS) FRSM 3-4598-12Fonds De La Recherche Scientifique - FNRS (FNRS) GEQ U.G030.19Fonds De La Recherche Scientifique - FNRS (FNRS) J006120FStichting Tegen Kanker (Fondation Contre le Cancer) 2016-093
6 · The paper itself

Abstract

The thyroid gland regulates growth and metabolism via production of thyroid hormone in follicles composed of thyrocytes. So far, thyrocytes have been assumed to be a homogenous population. To uncover heterogeneity in the thyrocyte population and molecularly characterize the non-thyrocyte cells surrounding the follicle, we developed a single-cell transcriptome atlas of the region containing the zebrafish thyroid gland. The 6249-cell atlas includes profiles of thyrocytes, blood vessels, lymphatic vessels, immune cells, and fibroblasts. Further, the thyrocytes show expression heterogeneity, including bimodal expression of the transcription factor pax2a. To validate thyrocyte heterogeneity, we generated a CRISPR/Cas9-based pax2a knock-in line that monitors pax2a expression in the thyrocytes. A population of pax2a-low mature thyrocytes interspersed in individual follicles can be distinguished. We corroborate heterogeneity within the thyrocyte population using RNA sequencing of pax2a-high and pax2a-low thyrocytes, which demonstrates 20% differential expression in transcriptome between the two subpopulations. Our results identify and validate transcriptional differences within the presumed homogenous thyrocyte population.

Indexed as

Thyroid Epithelial CellsThyroid GlandAnimalsGene Expression ProfilingTranscriptomeZebrafishCRISPR/Cas9heterogeneitysingle-cellthyroid glandzebrafish

Identifiers

PMID33140917
PMCPMC7726803
OpenAlexW3095773353

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.