Evidence map›Paper›PMID 33140449›Full record

ArticleFASEB journal : official publication of the Federation of American Societies for Experimental Biology2021

Transcriptomic responses from improved murine sepsis models can better mimic human surgical sepsis.

Philip A Efron, Dijoia B Darden, Zhongkai Wang, Dina C Nacionales, Maria-Cecilia Lopez, Russell B Hawkins, Michael C Cox, Jaimar C Rincon, Ricardo Ungaro, Marvin L Dirain and 14 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

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  13. Role of Complement and Histones in Sepsis.Frontiers in medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 5 institutions in 1 country.

Philip A EfronDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Dijoia B DardenDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Zhongkai WangDepartment of Biostatistics, College of Medicine, University of Florida, Gainesville, FL, USA.
Dina C NacionalesDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Maria-Cecilia LopezDepartment of Molecular Genetics and Microbiology, College of Medicine, University of Florida, Gainesville, FL, USA.
Russell B HawkinsDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Michael C CoxDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Jaimar C RinconDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Ricardo UngaroDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Marvin L DirainDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Gabriela L GhitaDepartment of Biostatistics, College of Medicine, University of Florida, Gainesville, FL, USA.
Tianmeng ChenDepartment of Surgery, University of Pittsburgh, Pittsburgh, PA, USA.
Timothy R BilliarDepartment of Surgery, University of Pittsburgh, Pittsburgh, PA, USA.
Matthew J DelanoDepartment of Surgery, University of Michigan, Ann Arbor, MI, USA.
Christiaan LeeuwenburghDepartment of Aging and Geriatric Research, College of Medicine, University of Florida, Gainesville, FL, USA.
Azra BihoracDepartment of Medicine, College of Medicine, University of Florida, Gainesville, FL, USA.
Scott C BrakenridgeDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Frederick A MooreDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Alicia M MohrDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Ronald G TompkinsDepartment of Surgery, Harvard Medical School, Massachusetts General Hospital, Boston, MA, USA.
Babette A BrumbackDepartment of Biostatistics, College of Medicine, University of Florida, Gainesville, FL, USA.
Henry V BakerDepartment of Molecular Genetics and Microbiology, College of Medicine, University of Florida, Gainesville, FL, USA.
Gilbert R UpchurchDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
Lyle L MoldawerDepartment of Surgery, College of Medicine, University of Florida, Gainesville, FL, USA.
University of Florida · USUniversity of Pittsburgh · USFlorida College · USHarvard University · USUniversity of Michigan–Ann Arbor · US

Funding

PICS: A New Horizon for Surgical Critical CareP50GM111152 · NIGMS · UNIVERSITY OF FLORIDA · PI MOORE, FREDERICK A · 2014 to 2018
$10.7M
Molecular Biology in Burns and TraumaT32GM008721 · NIGMS · UNIVERSITY OF FLORIDA · PI Philip A Efron · 1999 to 2026
$5.0M
Chronic Stress and Anemia Recovery following Major TraumaR01GM105893 · NIGMS · UNIVERSITY OF FLORIDA · PI MOHR, ALICIA M · 2013 to 2021
$3.5M
REGULATION ON MONOKINE PRODUCTION IN TRAUMA AND SURGERYR01GM040586 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI MOLDAWER, LYLE L · 1988 to 2016
$2.6M
Validation of a Genomics Based Prognostic in Severe TraumaR01GM104481 · NIGMS · UNIVERSITY OF FLORIDA · PI MOLDAWER, LYLE L · 2013 to 2016
$1.8M
Hematopoietic Stem Cell Dysfunction in the Elderly after Severe InjuryR01GM113945 · NIGMS · UNIVERSITY OF FLORIDA · PI EFRON, PHILIP A · 2015 to 2019
$1.6M
NIGMS NIH HHS P50 GM111152NIGMS NIH HHS R01 GM040586NIGMS NIH HHS R01 GM104481NIGMS NIH HHS R01 GM105893NIGMS NIH HHS R01 GM113945NIGMS NIH HHS T32 GM008721
6 · The paper itself

Abstract

Historically, murine models of inflammation in biomedical research have been shown to minimally correlate with genomic expression patterns from blood leukocytes in humans. In 2019, our laboratory reported an improved surgical sepsis model of cecal ligation and puncture (CLP) that provides additional daily chronic stress (DCS), as well as adhering to the Minimum Quality Threshold in Pre-Clinical Sepsis Studies (MQTiPSS) guidelines. This model phenotypically recapitulates the persistent inflammation, immunosuppression, and catabolism syndrome observed in adult human surgical sepsis survivors. Whether these phenotypic similarities between septic humans and mice are replicated at the circulating blood leukocyte transcriptome has not been demonstrated. Our analysis, in contrast with previous findings, demonstrated that genome-wide expression in our new murine model more closely approximated human surgical sepsis patients, particularly in the more chronic phases of sepsis. Importantly, our new model of murine surgical sepsis with chronic stress did not reflect well gene expression patterns from humans with community-acquired sepsis. Our work indicates that improved preclinical murine sepsis modeling can better replicate both the phenotypic and transcriptomic responses to surgical sepsis, but cannot be extrapolated to other sepsis etiologies. Importantly, these improved models can be a useful adjunct to human-focused and artificial intelligence-based forms of research in order to improve septic patients' morbidity and mortality.

Indexed as

Disease Models, AnimalPhenotypeTranscriptomeAdultAgedAge FactorsAnimalsCecumCohort StudiesFemaleGene Expression ProfilingHumansInflammationLeukocytesLigationMaleinflammationsepsistranscriptometranslational medicine

Identifiers

PMID33140449
PMCPMC7855423
OpenAlexW3094958176

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.