Evidence map›Paper›PMID 33139798›Full record

ArticleBritish journal of cancer2021

A balance score between immune stimulatory and suppressive microenvironments identifies mediators of tumour immunity and predicts pan-cancer survival.

Tolga Turan, Sarah Kongpachith, Kyle Halliwill, Jessica Roelands, Wouter Hendrickx, Francesco M Marincola, Thomas J Hudson, Howard J Jacob, Davide Bedognetti, Josue Samayoa and 1 more

Erratum issuedAbstract read
In one paragraph

Article in British journal of cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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  19. The immune landscape of solid pediatric tumors.Journal of experimental & clinical cancer research : CR · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Tolga TuranComputational Immunology and Oncology (CIAO), AbbVie, Redwood City, CA, USA.
Sarah KongpachithComputational Immunology and Oncology (CIAO), AbbVie, Redwood City, CA, USA.
Kyle HalliwillComputational Immunology and Oncology (CIAO), AbbVie, Redwood City, CA, USA.
Jessica RoelandsCancer Research Department, Sidra Medicine, Doha, Qatar.ORCID http://orcid.org/0000-0003-3631-2041
Wouter HendrickxCancer Research Department, Sidra Medicine, Doha, Qatar.
Francesco M MarincolaRefuge Biotechnologies, Menlo Park, CA, USA.
Thomas J HudsonComputational Immunology and Oncology (CIAO), AbbVie, Redwood City, CA, USA.
Howard J JacobGenomics Research Center (GRC), AbbVie, Lake County, IL, USA.
Davide BedognettiCancer Research Department, Sidra Medicine, Doha, Qatar. dbedognetti@sidra.org.
Josue SamayoaComputational Immunology and Oncology (CIAO), AbbVie, Redwood City, CA, USA. josue.samayoa@abbvie.com.
Michele CeccarelliDepartment of Electrical Engineering and Information Technology, University of Naples "Federico II", Naples, Italy. michele.ceccarelli@unina.it.

Funding

Associazione Italiana per la Ricerca sul Cancro (Italian Association for Cancer Research) IG2018-21846
6 · The paper itself

Abstract

backgroundThe balance between immune-stimulatory and immune-suppressive mechanisms in the tumour microenvironment is associated with tumour rejection and can predict the efficacy of immune checkpoint-inhibition therapies.

methodsWe consider the observed differences between the transcriptional programmes associated with cancer types where the levels of immune infiltration predict a favourable prognosis versus those in which the immune infiltration predicts an unfavourable prognosis and defined a score named Mediators of Immune Response Against Cancer in soLid microEnvironments (MIRACLE). MIRACLE deconvolves T cell infiltration, from inhibitory mechanisms, such as TGFβ, EMT and PI3Kγ signatures.

resultsOur score outperforms current state-of-the-art immune signatures as a predictive marker of survival in TCGA (n = 9305, HR: 0.043, p value: 6.7 × 10

conclusionsThe association of cancer outcome with the level of infiltrating immune cells is mediated by the balance of activatory and suppressive factors. MIRACLE accounts for this balance and predicts favourable cancer outcomes.

Indexed as

Cohort StudiesDatabases, GeneticHumansImmune Checkpoint InhibitorsImmunologic SurveillanceLymphocytes, Tumor-InfiltratingNeoplasmsSurvival AnalysisTumor MicroenvironmentImmune Checkpoint Inhibitors

Identifiers

PMID33139798
PMCPMC7884411

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.