Evidence map›Paper›PMID 33139712›Full record

ArticleNature communications2020

APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer's disease patient iPSC-derived cerebral organoids.

Jing Zhao, Yuan Fu, Yu Yamazaki, Yingxue Ren, Mary D Davis, Chia-Chen Liu, Wenyan Lu, Xue Wang, Kai Chen, Yesesri Cherukuri and 13 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 252 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
252citing papers in PubMed, 2 pooled it
22.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

252 citing papers in PubMed, 2 syntheses or guidelines pooled it, 356 citations in OpenAlex.

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192 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

Jing ZhaoDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Yuan FuDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Yu YamazakiDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.ORCID http://orcid.org/0000-0002-0806-4960
Yingxue RenDepartment of Health Sciences Research, Mayo Clinic, Jacksonville, FL, 32224, USA.
Mary D DavisDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Chia-Chen LiuDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.ORCID http://orcid.org/0000-0001-7203-3926
Wenyan LuDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Xue WangDepartment of Health Sciences Research, Mayo Clinic, Jacksonville, FL, 32224, USA.
Kai ChenDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Yesesri CherukuriDepartment of Health Sciences Research, Mayo Clinic, Jacksonville, FL, 32224, USA.
Lin JiaDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Yuka A MartensDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.ORCID http://orcid.org/0000-0002-5194-4269
Lucy JobDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Francis ShueDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.ORCID http://orcid.org/0000-0003-1659-1952
Thanh Thanh NguyenDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.ORCID http://orcid.org/0000-0002-2281-6540
Steven G YounkinDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Neill R Graff-RadfordDepartment of Neurology, Mayo Clinic, Jacksonville, FL, 32224, USA.
Zbigniew K WszolekDepartment of Neurology, Mayo Clinic, Jacksonville, FL, 32224, USA.
David A BrafmanSchool of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ, 85287, USA.
Yan W AsmannDepartment of Health Sciences Research, Mayo Clinic, Jacksonville, FL, 32224, USA.
Nilüfer Ertekin-TanerDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Takahisa KanekiyoDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA.
Guojun BuDepartment of Neuroscience, Mayo Clinic, Jacksonville, FL, 32224, USA. bu.guojun@mayo.edu.ORCID http://orcid.org/0000-0003-3491-1016
Mayo Clinic in Florida · USArizona State University · USJacksonville College · US

Funding

Research Education ComponentP30AG062677 · NIA · MAYO CLINIC ROCHESTER · PI Walter K. Kremers · 2019 to 2026
$33.5M
Integrating the exposome and methylome to inform brain molecular changes in ADRD across established diverse cohorts.U01AG046139 · NIA · UNIVERSITY OF FLORIDA · PI ERTEKIN-TANER, NILUFER, PETERS, METTE · 2013 to 2022
$24.6M
Viral Vectors CoreP01NS074969 · NINDS · WASHINGTON UNIVERSITY · PI SNIDER, BARBARA JOY · 2012 to 2021
$13.0M
Integrative translational discovery of vascular risk factors in aging and dementiaRF1AG051504 · NIA · MAYO CLINIC JACKSONVILLE · PI BU, GUOJUN, ERTEKIN-TANER, NILUFER · 2015 to 2019
$9.8M
Harnessing Molecular Networks of Resilience for Therapeutic Discoveries in ADR01AG061796 · NIA · MAYO CLINIC JACKSONVILLE · PI ERTEKIN-TANER, NILUFER · 2018 to 2022
$5.7M
TREM2-mediated microglial dynamic function in Alzheimer diseaseR01AG066395 · NIA · MAYO CLINIC JACKSONVILLE · PI ZHAO, NA · 2020 to 2024
$3.7M
ApoE Receptor Pathways to Intraneuronal AbetaR01AG027924 · NIA · WASHINGTON UNIVERSITY · PI LI, YONGHE · 2006 to 2021
$3.7M
Impact of ApoE2 on aging-related conditionsRF1AG057181 · NIA · MAYO CLINIC JACKSONVILLE · PI KANEKIYO, TAKAHISA · 2018 to 2018
$3.7M
ApoE isoform-specific therapy for Alzheimer diseaseRF1AG046205 · NIA · MAYO CLINIC JACKSONVILLE · PI ZHAO, NA · 2019 to 2019
$3.1M
ApoE pathway in cerebrovascular Aβ clearance in Alzheimer’s diseaseR37AG027924 · NIA · MAYO CLINIC JACKSONVILLE · PI BU, GUOJUN · 2017 to 2020
$2.4M
NIA NIH HHS P30 AG062677NIA NIH HHS R01 AG027924NIA NIH HHS R01 AG061796NIA NIH HHS R01 AG066395NIA NIH HHS R37 AG027924NIA NIH HHS RF1 AG046205NIA NIH HHS RF1 AG051504NIA NIH HHS RF1 AG057181NIA NIH HHS U01 AG046139NINDS NIH HHS P01 NS074969
6 · The paper itself

Abstract

APOE4 is the strongest genetic risk factor associated with late-onset Alzheimer's disease (AD). To address the underlying mechanism, we develop cerebral organoid models using induced pluripotent stem cells (iPSCs) with APOE ε3/ε3 or ε4/ε4 genotype from individuals with either normal cognition or AD dementia. Cerebral organoids from AD patients carrying APOE ε4/ε4 show greater apoptosis and decreased synaptic integrity. While AD patient-derived cerebral organoids have increased levels of Aβ and phosphorylated tau compared to healthy subject-derived cerebral organoids, APOE4 exacerbates tau pathology in both healthy subject-derived and AD patient-derived organoids. Transcriptomics analysis by RNA-sequencing reveals that cerebral organoids from AD patients are associated with an enhancement of stress granules and disrupted RNA metabolism. Importantly, isogenic conversion of APOE4 to APOE3 attenuates the APOE4-related phenotypes in cerebral organoids from AD patients. Together, our study using human iPSC-organoids recapitulates APOE4-related phenotypes and suggests APOE4-related degenerative pathways contributing to AD pathogenesis.

Indexed as

Alzheimer DiseaseApolipoprotein E3Apolipoprotein E4Gene Expression RegulationGenotypeHumansInduced Pluripotent Stem CellsOrganoidsRNASynapsesTranscriptomeApolipoprotein E3Apolipoprotein E4apolipoprotein E7, humanRNA

Identifiers

PMID33139712
PMCPMC7608683
OpenAlexW3095784700

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.