Evidence map›Paper›PMID 33139697›Full record

ArticleNature communications2020

The interaction of DNA repair factors ASCC2 and ASCC3 is affected by somatic cancer mutations.

Junqiao Jia, Eva Absmeier, Nicole Holton, Agnieszka J Pietrzyk-Brzezinska, Philipp Hackert, Katherine E Bohnsack, Markus T Bohnsack, Markus C Wahl

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Transcriptomic Characterization of Male Formosan Pangolin (Animals : an open access journal from MDPI · 2024
    Article
  6. Article
  7. A ubiquitin language communicates ribosomal distress.Seminars in cell & developmental biology · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Junqiao JiaLaboratory of Structural Biochemistry, Freie Universität Berlin, D-14195, Berlin, Germany.ORCID 0000-0001-6952-7327
Eva AbsmeierLaboratory of Structural Biochemistry, Freie Universität Berlin, D-14195, Berlin, Germany.
Nicole HoltonLaboratory of Structural Biochemistry, Freie Universität Berlin, D-14195, Berlin, Germany.
Agnieszka J Pietrzyk-BrzezinskaLaboratory of Structural Biochemistry, Freie Universität Berlin, D-14195, Berlin, Germany.
Philipp HackertDepartment of Molecular Biology, University Medical Centre Göttingen, Göttingen, Germany.
Katherine E BohnsackDepartment of Molecular Biology, University Medical Centre Göttingen, Göttingen, Germany.ORCID 0000-0001-6035-4255
Markus T BohnsackDepartment of Molecular Biology, University Medical Centre Göttingen, Göttingen, Germany.
Markus C WahlLaboratory of Structural Biochemistry, Freie Universität Berlin, D-14195, Berlin, Germany. markus.wahl@fu-berlin.de.ORCID 0000-0002-2811-5307
University of Göttingen · DEFreie Universität Berlin · DEHelmholtz-Zentrum Berlin für Materialien und Energie · DELodz University of Technology · PLMRC Laboratory of Molecular Biology · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ASCC3 subunit of the activating signal co-integrator complex is a dual-cassette Ski2-like nucleic acid helicase that provides single-stranded DNA for alkylation damage repair by the α-ketoglutarate-dependent dioxygenase AlkBH3. Other ASCC components integrate ASCC3/AlkBH3 into a complex DNA repair pathway. We mapped and structurally analyzed interacting ASCC2 and ASCC3 regions. The ASCC3 fragment comprises a central helical domain and terminal, extended arms that clasp the compact ASCC2 unit. ASCC2-ASCC3 interfaces are evolutionarily highly conserved and comprise a large number of residues affected by somatic cancer mutations. We quantified contributions of protein regions to the ASCC2-ASCC3 interaction, observing that changes found in cancers lead to reduced ASCC2-ASCC3 affinity. Functional dissection of ASCC3 revealed similar organization and regulation as in the spliceosomal RNA helicase Brr2. Our results delineate functional regions in an important DNA repair complex and suggest possible molecular disease principles.

Indexed as

DNA RepairAmino Acid SequenceConserved SequenceDNA HelicasesHEK293 CellsHumansMutationNeoplasmsNuclear ProteinsProtein BindingProtein Conformation, alpha-HelicalProtein DomainsRecombinant ProteinsRibonucleoproteins, Small NuclearRNA HelicasesSpliceosomesASCC2 protein, humanASCC3 protein, humanDNA HelicasesNuclear ProteinsRecombinant ProteinsRibonucleoproteins, Small NuclearRNA HelicasesSNRNP200 protein, human

Identifiers

PMID33139697
PMCPMC7608686
OpenAlexW3096897583

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.