Evidence map›Paper›PMID 33138918›Full record

ArticleeLife2020

A fully automated high-throughput workflow for 3D-based chemical screening in human midbrain organoids.

Henrik Renner, Martha Grabos, Katharina J Becker, Theresa E Kagermeier, Jie Wu, Mandy Otto, Stefan Peischard, Dagmar Zeuschner, Yaroslav TsyTsyura, Paul Disse and 5 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed, 1 pooled it
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 1 synthesis or guideline pooled it, 206 citations in OpenAlex.

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  8. Engineering brain organoids: from neurodevelopmental modeling to translational barriers.Journal of artificial organs : the official journal of the Japanese Society for Artificial Organs · 2026
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82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Henrik RennerDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.ORCID 0000-0002-9621-4569
Martha GrabosDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Katharina J BeckerDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Theresa E KagermeierDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Jie WuMax Planck Research Group for RNA Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Mandy OttoDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Stefan PeischardDepartment of Cardiovascular Medicine, Institute for Genetics of Heart Diseases, University Hospital Münster, Münster, Germany.ORCID 0000-0002-1571-9646
Dagmar ZeuschnerElectron Microscopy Unit, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Yaroslav TsyTsyuraCellular Biophysics Group, Institute for Medical Physics and Biophysics, Westfälische Wilhelms-Universität Münster, Münster, Germany.
Paul DisseDepartment of Cardiovascular Medicine, Institute for Genetics of Heart Diseases, University Hospital Münster, Münster, Germany.
Jürgen KlingaufCellular Biophysics Group, Institute for Medical Physics and Biophysics, Westfälische Wilhelms-Universität Münster, Münster, Germany.
Sebastian A LeidelMax Planck Research Group for RNA Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.ORCID 0000-0002-0523-6325
Guiscard SeebohmDepartment of Cardiovascular Medicine, Institute for Genetics of Heart Diseases, University Hospital Münster, Münster, Germany.
Hans R SchölerDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.
Jan M BruderDepartment for Cell and Developmental Biology, Max Planck Institute for molecular Biomedicine, Münster, Germany.ORCID 0000-0003-3126-0625
University of Münster · DEMax Planck Institute for Molecular Biomedicine · DEUniversity Hospital Münster · DEUniversity of Bern · CH

Funding

H2020 European Research Council grant agreement No [669168]
6 · The paper itself

Abstract

Three-dimensional (3D) culture systems have fueled hopes to bring about the next generation of more physiologically relevant high-throughput screens (HTS). However, current protocols yield either complex but highly heterogeneous aggregates ('organoids') or 3D structures with less physiological relevance ('spheroids'). Here, we present a scalable, HTS-compatible workflow for the automated generation, maintenance, and optical analysis of human midbrain organoids in standard 96-well-plates. The resulting organoids possess a highly homogeneous morphology, size, global gene expression, cellular composition, and structure. They present significant features of the human midbrain and display spontaneous aggregate-wide synchronized neural activity. By automating the entire workflow from generation to analysis, we enhance the intra- and inter-batch reproducibility as demonstrated via RNA sequencing and quantitative whole mount high-content imaging. This allows assessing drug effects at the single-cell level within a complex 3D cell environment in a fully automated HTS workflow.

Indexed as

WorkflowAutomationCalciumCell LineageDopamineHumansImaging, Three-DimensionalMesencephalonOrganoidsPatch-Clamp TechniquesPluripotent Stem CellsReproducibility of ResultsSequence Analysis, RNACalciumDopamine3D cell cultureautomationforebrainhigh content imaginghigh throughput screeninghumanmidbrainorganoidregenerative medicinestem cells

Identifiers

PMID33138918
PMCPMC7609049
OpenAlexW3095251182

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.