Evidence map›Paper›PMID 33138038›Full record

ArticleToxins2020

Transcriptomic and Proteomic Analysis Reveals Mechanisms of Patulin-Induced Cell Toxicity in Human Embryonic Kidney Cells.

Nianfa Han, Ruilin Luo, Jiayu Liu, Tianmin Guo, Jiayu Feng, Xiaoli Peng

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nianfa HanBeijing Jihua Biotechnology Services Co., LTD, Beijing 102200, China.
Ruilin LuoCollege of Food Science and Engineering, Northwest A&F University, Yangling 712100, China.
Jiayu LiuCollege of Food Science and Engineering, Northwest A&F University, Yangling 712100, China.
Tianmin GuoCollege of Food Science and Engineering, Northwest A&F University, Yangling 712100, China.
Jiayu FengCollege of Food Science and Engineering, Northwest A&F University, Yangling 712100, China.
Xiaoli PengCollege of Food Science and Engineering, Northwest A&F University, Yangling 712100, China.
Northwest A&F University · CN

Funding

Beijing Jihua Biotechnology Services Co. LTD 2020Fundamental Research Funds for the Central Universities 2014YB021National Natural Science Foundation of China 31571928, 31201286
6 · The paper itself

Abstract

Patulin (PAT) is a natural mycotoxin that commonly contaminates fruits and fruit-based products. Previous work indicated that PAT-induced apoptosis in which reactive oxygen species (ROS) are involved in human embryonic kidney (HEK293) cells. To uncover novel aspects of the possible mechanism of PAT nephrotoxicity, the transcriptome and proteome profiles were investigated using the digital gene expression (DGE) and isobaric tags for relative and absolute quantitation (iTRAQ) proteomic approaches. A total of 127 genes and 85 proteins were found to express differentially in response to 5 μM PAT for 10 h in HEK293 cells. The most dramatic changes of expression were noticed with genes or proteins related to apoptosis, oxidative phosphorylation ribosome and cell cycle. Especially, the activation of caspase 3, UQCR11, active transport form and endocytosis appeared to be crucial in PAT kidney cytotoxicity. PAT also seemed to be associated with cancer and neuropathic disease as pathways associated with carcinogenesis, Alzheimer's disease and Parkinson's disease were induced. Overall, this study served to uncover overall insights associated with signaling pathway that modulated the PAT toxicity mechanism.

Indexed as

ApoptosisCaspase 3Cell SurvivalHEK293 CellsHumansPatulinProtein Interaction MapsProteomeProteomicsTranscriptomeCASP3 protein, humanCaspase 3PatulinProteomeapoptosisHEK293 cellspatulinproteomicrenal cytotoxicitytranscriptomic

Identifiers

PMID33138038
PMCPMC7692636
OpenAlexW3095128132

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.