Evidence map›Paper›PMID 33137951›Full record

ArticleGenes2020

Exploration of a Resequenced Tomato Core Collection for Phenotypic and Genotypic Variation in Plant Growth and Fruit Quality Traits.

Raana Roohanitaziani, Ruud A de Maagd, Michiel Lammers, Jos Molthoff, Fien Meijer-Dekens, Martijn P W van Kaauwen, Richard Finkers, Yury Tikunov, Richard G F Visser, Arnaud G Bovy

Abstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Genomic variation across distribution of Micro-Tom, a model cultivar of tomato (Solanum lycopersicum).DNA research : an international journal for rapid publication of reports on genes and genomes · 2024
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  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Raana RoohanitazianiPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.ORCID 0000-0003-3210-750X
Ruud A de MaagdBioscience, Wageningen University & Research, P.O. Box 16, 6700 AA Wageningen, The Netherlands.ORCID 0000-0001-7049-2029
Michiel LammersBioscience, Wageningen University & Research, P.O. Box 16, 6700 AA Wageningen, The Netherlands.
Jos MolthoffPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.
Fien Meijer-DekensPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.
Martijn P W van KaauwenPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.ORCID 0000-0002-6587-8178
Richard FinkersPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.ORCID 0000-0002-4368-8058
Yury TikunovPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.
Richard G F VisserPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.
Arnaud G BovyPlant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A tomato core collection consisting of 122 gene bank accessions, including landraces, old cultivars, and wild relatives, was explored for variation in several plant growth, yield and fruit quality traits. The resequenced accessions were also genotyped with respect to a number of mutations or variations in key genes known to underlie these traits. The yield-related traits fruit number and fruit weight were much higher in cultivated varieties when compared to wild accessions, while, in wild tomato accessions, Brix was higher than in cultivated varieties. Known mutations in fruit size and shape genes could well explain the fruit size variation, and fruit colour variation could be well explained by known mutations in key genes of the carotenoid and flavonoid pathway. The presence and phenotype of several plant architecture affecting mutations, such as

Indexed as

Databases, GeneticDomesticationFruitGenetic VariationGenome, PlantGenotypeMutationPhenotypePhylogenyPlant BreedingQuantitative Trait LociSolanum lycopersicumallele miningdomesticationgenotypingphenotypingS. lycopersicumtomatotomato germplasm

Identifiers

PMID33137951
PMCPMC7692805

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.