Evidence map›Paper›PMID 33134237›Full record

ArticleFrontiers in public health2020

Identification of a Novel Pathogen Using Family-Wide PCR: Initial Confirmation of COVID-19 in Thailand.

Supaporn Wacharapluesadee, Rome Buathong, Sopon Iamsirithawon, Walairat Chaifoo, Teerada Ponpinit, Chanida Ruchisrisarod, Chanikarn Sonpee, Panticha Katasrila, Siriporn Yomrat, Siriporn Ghai and 8 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in public health, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  5. Dating first cases of COVID-19.PLoS pathogens · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Supaporn WacharapluesadeeThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Rome BuathongDepartment of Disease Control, Ministry of Public Health, Nonthaburi, Thailand.
Sopon IamsirithawonDepartment of Disease Control, Ministry of Public Health, Nonthaburi, Thailand.
Walairat ChaifooDepartment of Disease Control, Ministry of Public Health, Nonthaburi, Thailand.
Teerada PonpinitThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Chanida RuchisrisarodThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Chanikarn SonpeeThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Panticha KatasrilaThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Siriporn YomratThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Siriporn GhaiThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Sunee SirivichayakulFaculty of Medicine, Chulalongkorn University, Bangkok, Thailand.
Pilailuk OkadaDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Nanthawan MekhaDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Opart KarnkawinpongDepartment of Medical Sciences, Ministry of Public Health, Nonthaburi, Thailand.
Sumonmal UttayamakulDepartment of Disease Control, Bamrasnaradura Infectious Disease Institute, Ministry of Public Health, Nonthaburi, Thailand.
Apichart VachiraphanDepartment of Disease Control, Bamrasnaradura Infectious Disease Institute, Ministry of Public Health, Nonthaburi, Thailand.
Tanarak PlipatDepartment of Disease Control, Ministry of Public Health, Nonthaburi, Thailand.
Thiravat HemachudhaThai Red Cross Emerging Infectious Diseases Health Science Centre, World Health Organization Collaborating Centre for Research and Training on Viral Zoonoses, King Chulalongkorn University, Pathumwan, Thailand.
Chulalongkorn University · THMinistry of Public Health · THDepartment of Disease Control · THDepartment of Medical Sciences · THBamrasnaradura Infectious Diseases Institute · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In resource-limited countries, early detection of novel pathogens is often challenging, due to financial and technical constraints. This study reports the efficacy of family-wide polymerase chain reaction (PCR) in screening, detecting, and identifying initial cases of the novel SARS-CoV-2 in Thailand. Respiratory secretions were collected from suspected individuals traveling from Wuhan, China to Thailand at the beginning of January 2020. Family-wide PCR assays yielded positive results for coronavirus in one traveler within 12 h on January 8, 2020. Nucleotide sequences (290 bp) showed 100% similarity to SARS-CoV-2. The whole genome sequence was further characterized by Next Generation Sequencing (NGS) for confirmation. Combining family-wide PCR, as a rapid screening tool, with NGS, for full genome characterization, could facilitate early detection and confirmation of a novel pathogen and enable early containment of a disease outbreak.

Indexed as

COVID-19ChinaHumansPolymerase Chain ReactionSARS-CoV-2ThailandcoronavirusCOVID-19family-wide PCRNGSnovel pathogenSARS-CoV-2Thailand

Identifiers

PMID33134237
PMCPMC7579402
OpenAlexW3092409820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.