Evidence map›Paper›PMID 33132628›Full record

ArticleJournal of proteins and proteomics2020

A rapid and sensitive method to detect SARS-CoV-2 virus using targeted-mass spectrometry.

Praveen Singh, Rahul Chakraborty, Robin Marwal, V S Radhakrishan, Akash Kumar Bhaskar, Himanshu Vashisht, Mahesh S Dhar, Shalini Pradhan, Gyan Ranjan, Mohamed Imran and 17 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of proteins and proteomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 4 pooled it
1.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 4 syntheses or guidelines pooled it, 58 citations in OpenAlex.

  1. Rapid, point-of-care antigen tests for diagnosis of SARS-CoV-2 infection.The Cochrane database of systematic reviews · 2022
    Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Review
  6. Immunoproteomics for wastewater-based health surveillance: A review.Environmental science and ecotechnology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. CovAnalytical chemistry · 2022
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
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  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 3 institutions in 1 country.

Praveen Singh *CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Rahul Chakraborty *CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Robin Marwal *National Center for Disease Control, New Delhi, 110054 India.
V S Radhakrishan *National Center for Disease Control, New Delhi, 110054 India.
Akash Kumar BhaskarCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Himanshu VashishtNational Center for Disease Control, New Delhi, 110054 India.
Mahesh S DharNational Center for Disease Control, New Delhi, 110054 India.
Shalini PradhanCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Gyan RanjanCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Mohamed ImranCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Anurag RajCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Uma SharmaNational Center for Disease Control, New Delhi, 110054 India.
Priyanka SinghNational Center for Disease Control, New Delhi, 110054 India.
Hemlata LallNational Center for Disease Control, New Delhi, 110054 India.
Meena DuttaNational Center for Disease Control, New Delhi, 110054 India.
Parth GargDepartment of Computational Biology, Indraprastha Institute of Information Technology, Okhla Industrial Estate, Phase III, New Delhi, 110020 India.
Arjun RayDepartment of Computational Biology, Indraprastha Institute of Information Technology, Okhla Industrial Estate, Phase III, New Delhi, 110020 India.
Debasis DashCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Sridhar SivasubbuCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Hema GogiaNational Center for Disease Control, New Delhi, 110054 India.
Preeti MadanNational Center for Disease Control, New Delhi, 110054 India.
Sandhya KabraNational Center for Disease Control, New Delhi, 110054 India.
Sujeet K SinghNational Center for Disease Control, New Delhi, 110054 India.
Anurag AgrawalCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.
Partha RakshitNational Center for Disease Control, New Delhi, 110054 India.
Pramod KumarNational Center for Disease Control, New Delhi, 110054 India.
Shantanu SenguptaCSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025 India.ORCID 0000-0001-8461-0735
National Center for Disease Control · INInstitute of Genomics and Integrative Biology · INIndraprastha Institute of Information Technology Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the last few months, there has been a global catastrophic outbreak of severe acute respiratory syndrome disease caused by the novel coronavirus SARS-CoV-2 affecting millions of people worldwide. Early diagnosis and isolation are key to contain the rapid spread of the virus. Towards this goal, we report a simple, sensitive and rapid method to detect the virus using a targeted mass spectrometric approach, which can directly detect the presence of virus from naso-oropharyngeal swabs. Using a multiple reaction monitoring we can detect the presence of two peptides specific to SARS-CoV-2 in a 2.3 min gradient run with 100% specificity and 90.5% sensitivity when compared to RT-PCR. Importantly, we further show that these peptides could be detected even in the patients who have recovered from the symptoms and have tested negative for the virus by RT-PCR highlighting the sensitivity of the technique. This method has the translational potential of in terms of the rapid diagnostics of symptomatic and asymptomatic COVID-19 and can augment current methods available for diagnosis of SARS-CoV-2.

Indexed as

COVID-19LC-MS/MSMRMNaso-oropharyngeal swabProteomicsSARS-CoV-2

Identifiers

PMID33132628
PMCPMC7457902
OpenAlexW3082786414

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.