Evidence map›Paper›PMID 33131680›Full record

ArticleJournal of neuroscience methods2021

Deep active learning for Interictal Ictal Injury Continuum EEG patterns.

Wendong Ge, Jin Jing, Sungtae An, Aline Herlopian, Marcus Ng, Aaron F Struck, Brian Appavu, Emily L Johnson, Gamaleldin Osman, Hiba A Haider and 20 more

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Using artificial intelligence to optimize anti-seizure treatment and EEG-guided decisions in severe brain injury.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2025
    Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors.

Wendong GeMassachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States.
Jin JingMassachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States.
Sungtae AnGeorgia Institute of Technology, College of Computing, Atlanta, GA, Georgia.
Aline HerlopianYale University, United States.
Marcus NgUniversity of Manitoba, Canada.
Aaron F StruckUniversity of Wisconsin Madison Department of Neurology, United States.
Brian AppavuUniversity of Arizona College of Medicine, Phoenix, United States.
Emily L JohnsonJohns Hopkins School of Medicine, United States.
Gamaleldin OsmanHenry Ford Hospital, United States.
Hiba A HaiderEmory University School of Medicine, Georgia.
Ioannis KarakisEmory University School of Medicine, Georgia.
Jennifer A KimYale University, United States.
Jonathan J HalfordMedical University of South Carolina, United States.
Monica B DhakarEmory University School of Medicine, Georgia.
Rani A SarkisBrigham and Women's Hospital, United States.
Christa B SwisherDuke University Hospital, United States.
Sarah SchmittMedical University of South Carolina, United States.
Jong Woo LeeBrigham and Women's Hospital, United States.
Mohammad TabaeizadehBaylor College of Medicine, United States.
Andres RodriguezEmory University School of Medicine, Georgia.
Nicolas GaspardUniversité Libre de Bruxelles, Hôpital Erasme and Yale University, Belgium.
Emily GilmoreYale University, Yale New Haven Hospital, United States.
Susan T HermanBarrow Neurological Institute, Phoenix, AZ, United States.
Peter W KaplanJohns Hopkins University, United States.
Jay PathmanathanUniversity of Pennsylvania, PA, United States.
Shenda HongGeorgia Institute of Technology, College of Computing, Atlanta, GA, Georgia.
Eric S RosenthalMassachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States.
Sahar ZafarMassachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States.
Jimeng SunUniversity of Illinois at Urbana-Champaign, College of Computing, Champaign, IL, United States.
M Brandon WestoverMassachusetts General Hospital, Department of Neurology, Boston, MA, United States; Harvard Medical School, Boston, MA, United States. Electronic address: mwestover@partners.org.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Integrative Motor Activity Biomarker for the Risk of Alzheimer's RiskRF1AG064312 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI HU, KUN · 2019 to 2019
$3.6M
Multimodal Network Connectivity Architecture (MOCA) of the Brain and its Role in the Recovery of Consciousness in Comatose Cardiac Arrest PatientsR01NS102574 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI GREER, DAVID MATTHEW, WU, ONA · 2018 to 2022
$3.4M
Investigation of Sleep in the Intensive Care Unit (ICU-SLEEP)R01NS102190 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI WESTOVER, MICHAEL BRANDON · 2018 to 2022
$3.2M
The Juvenile Myoclonic Epilepsy Connectome ProjectR01NS111022 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI STRUCK, AARON F · 2020 to 2024
$3.1M
Big Data and Deep Learning for the Interictal-Ictal-Injury ContiuumR01NS107291 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI WESTOVER, MICHAEL BRANDON · 2018 to 2022
$2.8M
NCATS NIH HHS UL1 TR001863NIA NIH HHS RF1 AG064312NINDS NIH HHS R01 NS102190NINDS NIH HHS R01 NS102574NINDS NIH HHS R01 NS107291NINDS NIH HHS R01 NS111022
6 · The paper itself

Abstract

objectivesSeizures and seizure-like electroencephalography (EEG) patterns, collectively referred to as "ictal interictal injury continuum" (IIIC) patterns, are commonly encountered in critically ill patients. Automated detection is important for patient care and to enable research. However, training accurate detectors requires a large labeled dataset. Active Learning (AL) may help select informative examples to label, but the optimal AL approach remains unclear.

methodsWe assembled >200,000 h of EEG from 1,454 hospitalized patients. From these, we collected 9,808 labeled and 120,000 unlabeled 10-second EEG segments. Labels included 6 IIIC patterns. In each AL iteration, a Dense-Net Convolutional Neural Network (CNN) learned vector representations for EEG segments using available labels, which were used to create a 2D embedding map. Nearest-neighbor label spreading within the embedding map was used to create additional pseudo-labeled data. A second Dense-Net was trained using real- and pseudo-labels. We evaluated several strategies for selecting candidate points for experts to label next. Finally, we compared two methods for class balancing within queries: standard balanced-based querying (SBBQ), and high confidence spread-based balanced querying (HCSBBQ).

resultsOur results show: 1) Label spreading increased convergence speed for AL. 2) All query criteria produced similar results to random sampling. 3) HCSBBQ query balancing performed best. Using label spreading and HCSBBQ query balancing, we were able to train models approaching expert-level performance across all pattern categories after obtaining ∼7000 expert labels.

conclusionOur results provide guidance regarding the use of AL to efficiently label large EEG datasets in critically ill patients.

Indexed as

ElectroencephalographyCluster AnalysisHumansNeural Networks, ComputerSeizuresActive learningConvolutional neural networkElectroencephalography(EEG)Embedding mapIctal Interictal Injury ContinuumMachine learningSeizure

Identifiers

PMID33131680
PMCPMC8135050

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.