Evidence map›Paper›PMID 33131181›Full record

ArticleHuman mutation2020

Loss of CBY1 results in a ciliopathy characterized by features of Joubert syndrome.

Daniel Epting, Lokuliyange D S Senaratne, Elisabeth Ott, Asbjørn Holmgren, Dulika Sumathipala, Selma M Larsen, Julia Wallmeier, Diana Bracht, Kari-Anne M Frikstad, Suzanne Crowley and 20 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Human mutation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Journal of medical genetics · 2022
    Article
  13. Article
  14. Genotype-phenotype correlates in Joubert syndrome: A review.American journal of medical genetics. Part C, Seminars in medical genetics · 2022
    Review
  15. DZIP1 regulates mammalian cardiac valve development through a Cby1-β-catenin mechanism.Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Article
  16. Article
  17. Article
  18. Identification ofBrain communications · 2021
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 11 institutions in 5 countries.

Daniel EptingDepartment of Medicine IV, Faculty of Medicine, Medical Center-University of Freiburg, Freiburg, Germany.
Lokuliyange D S SenaratneDepartment of Medical Genetics, Oslo University Hospital, University of Oslo, Oslo, Norway.
Elisabeth OttDepartment of Medicine IV, Faculty of Medicine, Medical Center-University of Freiburg, Freiburg, Germany.
Asbjørn HolmgrenDepartment of Medical Genetics, Oslo University Hospital, University of Oslo, Oslo, Norway.
Dulika SumathipalaDepartment of Medical Genetics, Oslo University Hospital, University of Oslo, Oslo, Norway.
Selma M LarsenDivision of Pediatric and Adolescent Medicine, Oslo University Hospital, University of Oslo, Oslo, Norway.
Julia WallmeierKlinik für Kinder- und Jugendmedizin, Universitätsklinikum Münster, Münster, Germany.
Diana BrachtKlinik für Kinder- und Jugendmedizin, Universitätsklinikum Münster, Münster, Germany.
Kari-Anne M FrikstadDepartment of Radiation Biology, Division of Cancer Medicine, Surgery and Transplantation, Institute for Cancer Research, Oslo University Hospitals-Norwegian Radium Hospital, Oslo, Norway.
Suzanne CrowleyDivision of Pediatric and Adolescent Medicine, Oslo University Hospital, University of Oslo, Oslo, Norway.
Alma SikiricDepartment of Neurohabilitation, Oslo University Hospital, Oslo, Norway.
Tuva BarøyDepartment of Medical Genetics, Oslo University Hospital, University of Oslo, Oslo, Norway.
Barbara Käsmann-KellnerSection of Pediatric Ophthalmology and Low Vision, Department of Ophthalmology, University of Saarland, Homburg, Germany.
Eva DeckerMedizinische Genetik Mainz, Limbach Genetics, Mainz, Germany.
Christian DeckerMedizinische Genetik Mainz, Limbach Genetics, Mainz, Germany.
Nadine BachmannMedizinische Genetik Mainz, Limbach Genetics, Mainz, Germany.
Sebastian PatzkeDepartment of Radiation Biology, Division of Cancer Medicine, Surgery and Transplantation, Institute for Cancer Research, Oslo University Hospitals-Norwegian Radium Hospital, Oslo, Norway.
Ian G PhelpsDepartment of Pediatrics, Seattle Children's Research Institute, University of Washington, Seattle, Washington, USA.
Nicholas KatsanisCenter for Human Disease Modeling, Duke University Medical Center, Durham, North Carolina, USA.
Rachel GilesDepartment of Nephrology and Hypertension, University Medical Center Utrecht, Utrecht, The Netherlands.
Miriam SchmidtsInternational Radboud Institute for Molecular Life Sciences, Radboud University Nijmegen, Nijmegen, The Netherlands.
Manuela ZucknickOslo Centre for Biostatistics and Epidemiology, Institute for Basic Medical Sciences, University of Oslo, Oslo, Norway.
Soeren S LienkampInstitute of Anatomy, University of Zurich, Zurich, Switzerland.
Heymut OmranKlinik für Kinder- und Jugendmedizin, Universitätsklinikum Münster, Münster, Germany.
Erica E DavisCenter for Human Disease Modeling, Duke University Medical Center, Durham, North Carolina, USA.
Dan DohertyDepartment of Pediatrics, Seattle Children's Research Institute, University of Washington, Seattle, Washington, USA.
Petter StrømmeDivision of Pediatric and Adolescent Medicine, Oslo University Hospital, University of Oslo, Oslo, Norway.
Eirik FrengenDepartment of Medical Genetics, Oslo University Hospital, University of Oslo, Oslo, Norway.
Carsten BergmannDepartment of Medicine IV, Faculty of Medicine, Medical Center-University of Freiburg, Freiburg, Germany.
Doriana MisceoDepartment of Medical Genetics, Oslo University Hospital, University of Oslo, Oslo, Norway.ORCID 0000-0002-6594-5801
Oslo University Hospital · NOGenetikum · DEKlinik und Poliklinik für Kinder- und Jugendmedizin · DEUniversity of Freiburg · DEDuke University · USSeattle Children's Hospital · USRadboud University Nijmegen · NLSaarland University · DEUniversity Medical Center Utrecht · NLUniversity of Oslo · NOUniversity of Zurich · CH

Funding

UW Center for Mendelian GenomicsU54HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, NICKERSON, DEBORAH A · 2012 to 2015
$20.0M
UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
Mechanisms of Brain Dysmorphology in MN1 C-Terminal Truncation Syndrome, a Novel Intellectual Developmental Disability Disorder P50HD103524 · NICHD · UNIVERSITY OF WASHINGTON · PI Sandra E Juul · 2020 to 2026
$9.9M
Molecular Genetics of BBSR01HD042601 · NICHD · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2003 to 2023
$8.2M
Genetic and Functional Studies of Human Ciliary SyndromesR01DK072301 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2005 to 2022
$7.2M
Identifying the missing heritability in recessive disorders using Joubert syndrome as a modelR01HD100730 · NICHD · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2020 to 2023
$2.0M
Joubert syndrome and related disorders of hindbrain developmentR01NS064077 · NINDS · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2010 to 2014
$1.8M
The Role of Basal Bodies in Wnt SignalingR01GM121317 · NIGMS · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI DAVIS, ERICA ELLEN · 2016 to 2019
$1.7M
NHGRI NIH HHS U54 HG006493NHGRI NIH HHS UM1 HG006493NICHD NIH HHS P50 HD103524NICHD NIH HHS R01 HD042601NICHD NIH HHS R01 HD100730NICHD NIH HHS U54HG006493NIDDK NIH HHS R01 DK072301NIGMS NIH HHS R01 GM121317NINDS NIH HHS R01 NS064077
6 · The paper itself

Abstract

Ciliopathies are clinically and genetically heterogeneous diseases. We studied three patients from two independent families presenting with features of Joubert syndrome: abnormal breathing pattern during infancy, developmental delay/intellectual disability, cerebellar ataxia, molar tooth sign on magnetic resonance imaging scans, and polydactyly. We identified biallelic loss-of-function (LOF) variants in CBY1, segregating with the clinical features of Joubert syndrome in the families. CBY1 localizes to the distal end of the mother centriole, contributing to the formation and function of cilia. In accordance with the clinical and mutational findings in the affected individuals, we demonstrated that depletion of Cby1 in zebrafish causes ciliopathy-related phenotypes. Levels of CBY1 transcript were found reduced in the patients compared with controls, suggesting degradation of the mutated transcript through nonsense-mediated messenger RNA decay. Accordingly, we could detect CBY1 protein in fibroblasts from controls, but not from patients by immunofluorescence. Furthermore, we observed reduced ability to ciliate, increased ciliary length, and reduced levels of the ciliary proteins AHI1 and ARL13B in patient fibroblasts. Our data show that CBY1 LOF-variants cause a ciliopathy with features of Joubert syndrome.

Indexed as

Abnormalities, MultipleAdolescentAnimalsCarrier ProteinsCerebellumChildChild, PreschoolCiliaCiliopathiesEye AbnormalitiesFemaleFibroblastsHomozygoteHumansInfantInfant, NewbornCarrier ProteinsCBY1 protein, humanNuclear ProteinsSmoothened ReceptorSMO protein, humanCBY1ciliopathyJoubert syndromeprimary cilia defectwhole exome sequencingzebrafish

Identifiers

PMID33131181
PMCPMC7756669
OpenAlexW3097268085

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.