Evidence map›Paper›PMID 33128686›Full record

ArticleMolecular biology reports2020

Polymorphisms PSCA rs2294008, IL-4 rs2243250 and MUC1 rs4072037 are associated with gastric cancer in a high risk population.

Patricio Gonzalez-Hormazabal, Rocío Retamales-Ortega, Maher Musleh, Marco Bustamante, Juan Stambuk, Raul Pisano, Hector Valladares, Enrique Lanzarini, Hector Chiong, Jose Suazo and 6 more

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In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. An association study on PSCA rs2294008 polymorphism and gastric cancer: A meta-analysis.Frontiers in gastroenterology (Lausanne, Switzerland) · 2022
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Patricio Gonzalez-HormazabalHuman Genetics Program, Institute of Biomedical Sciences (ICBM), School of Medicine, University of Chile, Santiago, Chile. patriciogonzalez@uchile.cl.ORCID http://orcid.org/0000-0001-9786-2210
Rocío Retamales-OrtegaHuman Genetics Program, Institute of Biomedical Sciences (ICBM), School of Medicine, University of Chile, Santiago, Chile.
Maher MuslehDepartment of Surgery, University of Chile Clinical Hospital, Santiago, Chile.
Marco BustamanteDepartment of Surgery, School of Medicine at Eastern Campus, University of Chile, Santiago, Chile.
Juan StambukDepartment of Surgery, San Juan de Dios Hospital, Santiago, Chile.
Raul PisanoDepartment of Surgery, San Juan de Dios Hospital, Santiago, Chile.
Hector ValladaresDepartment of Surgery, University of Chile Clinical Hospital, Santiago, Chile.
Enrique LanzariniDepartment of Surgery, University of Chile Clinical Hospital, Santiago, Chile.
Hector ChiongDepartment of Surgery, Barros Luco Hospital, Santiago, Chile.
Jose SuazoInstitute for Research in Dental Sciences, School of Dentistry, University of Chile, Santiago, Chile.
Luis A QuiñonesDepartment of Basic-Clinical Oncology, School of Medicine, University of Chile, Santiago, Chile.
Nelson M VarelaDepartment of Basic-Clinical Oncology, School of Medicine, University of Chile, Santiago, Chile.
V Gonzalo CastroHuman Genetics Program, Institute of Biomedical Sciences (ICBM), School of Medicine, University of Chile, Santiago, Chile.
Lilian JaraHuman Genetics Program, Institute of Biomedical Sciences (ICBM), School of Medicine, University of Chile, Santiago, Chile.
Ricardo A VerdugoHuman Genetics Program, Institute of Biomedical Sciences (ICBM), School of Medicine, University of Chile, Santiago, Chile.
Zoltan BergerDepartment of Gastroenterology, University of Chile Clinical Hospital, Santiago, Chile.
University of Chile · CLHospital Clínico de la Universidad de Chile · CLHospital San Juan de Dios · CLHospital Barros Luco-Trudeau · CL

Funding

ACTIN FILAMENTS AND NERVE GROWTHF06TW001007 · FIC · COLORADO STATE UNIVERSITY-FORT COLLINS · PI BAMBURG, JAMES R · 1985 to 1985
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Fondo de Fomento al Desarrollo Científico y Tecnológico 1151015Fondo de Fomento al Desarrollo Científico y Tecnológico 21160297Fondo de Fomento al Desarrollo Científico y Tecnológico D10E1007
6 · The paper itself

Abstract

Genetic variants are considered risk factors for gastric cancer. To date, 61 polymorphisms have been identified as associated with this disease. The aim of the present study was to analyze the association of some of those polymorphisms with GC in Chile. We performed a case-control study including 310 gastric cancer cases and 311 controls to assess the association of 36 single-nucleotide polymorphisms genotyped by Global Screening Array (GSA). Three polymorphisms was significantly associated: PSCA rs2294008 (allele model, OR = 1.49, 95%CI 1.17-1.88, P = 1.08 × 10-3), IL-4 rs2243250 (allele model, OR = 1.28, 95%CI 1.01-1.62, P = 0.04), and MUC1 rs4072037 (allele model, OR = 0.78, 95%CI 0.61-0.99, P = 0.04).PSCA rs2294008, IL-4 rs2243250 and MUC1 rs4072037 are associated with gastric cancer in Chile. It suggests that those polymorphisms could be used as biomarkers to assess the genetic risk for this cancer outside of the previously studied populations, not only for East Asians and Caucasians populations.

Indexed as

Polymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overAllelesAntigens, NeoplasmCase-Control StudiesChileFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeGPI-Linked ProteinsHumansInterleukin-4Antigens, NeoplasmGPI-Linked ProteinsInterleukin-4MUC1 protein, humanMucin-1Neoplasm ProteinsPSCA protein, humanGastric cancerIL-4MUC1PolymorphismPSCA

Identifiers

PMID33128686
OpenAlexW3095503517

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.