Evidence map›Paper›PMID 33126823›Full record

ArticleEpigenetics2021

Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background.

Delphine Lallias, Maria Bernard, Céline Ciobotaru, Nicolas Dechamp, Laurent Labbé, Lionel Goardon, Jean-Michel Le Calvez, Marjorie Bideau, Alexandre Fricot, Audrey Prézelin and 7 more

Abstract read
In one paragraph

Article in Epigenetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. iScience · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Changes in the Level of DNA Methylation inInternational journal of molecular sciences · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Delphine LalliasUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.ORCID 0000-0002-1609-0827
Maria BernardUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.ORCID 0000-0001-9005-5563
Céline CiobotaruUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.
Nicolas DechampUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.
Laurent LabbéINRAE, PEIMA, 29450, Sizun, France.
Lionel GoardonINRAE, PEIMA, 29450, Sizun, France.
Jean-Michel Le CalvezINRAE, PEIMA, 29450, Sizun, France.
Marjorie BideauINRAE, PEIMA, 29450, Sizun, France.
Alexandre FricotUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.
Audrey PrézelinUVSQ, INRAE, BREED, Jouy-en-Josas, France.
Mathieu CharlesUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.
Marco MoroldoUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.ORCID 0000-0002-4440-4950
Xavier CousinUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.ORCID 0000-0002-8520-3610
Olivier BouchezINRAE, GeT PlaGe, 31326, Castanet-Tolosan, France.
Alain RouletINRAE, GeT PlaGe, 31326, Castanet-Tolosan, France.ORCID 0000-0002-2824-9954
Edwige QuilletUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.
Mathilde Dupont-NivetUniversité Paris-Saclay, INRAE, AgroParisTech, GABI, 78350, Jouy-en-Josas, France.ORCID 0000-0002-9299-0560

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenotypic plasticity is a key component of the ability of organisms to respond to changing environmental conditions. In this study, we aimed to study the establishment of DNA methylation marks in response to an environmental stress in rainbow trout and to assess whether these marks depend on the genetic background. The environmental stress chosen here was temperature, a known induction factor of epigenetic marks in fish. To disentangle the role of epigenetic mechanisms such as DNA methylation in generating phenotypic variations, nine rainbow trout isogenic lines with no genetic variability within a line were used. For each line, half of the eggs were incubated at standard temperature (11°C) and the other half at high temperature (16°C), from eyed-stage to hatching. In order to gain a first insight into the establishment of DNA methylation marks in response to an early temperature regime (control 11°C vs. heated 16°C), we have studied the expression of 8

Indexed as

Oncorhynchus mykissAnimalsDNA MethylationEmbryonic DevelopmentGenetic BackgroundTemperatureDNA methylationdnmt3EpiRADseqisogenic linesrainbow troutTemperature

Identifiers

PMID33126823
PMCPMC8451451

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.