Evidence map›Paper›PMID 33125669›Full record

ArticleJournal of microbiology (Seoul, Korea)2020

Similarities and differences between 6S RNAs from Bradyrhizobium japonicum and Sinorhizobium meliloti.

Olga Y Burenina, Daria A Elkina, Anzhela Y Migur, Tatiana S Oretskaya, Elena Evguenieva-Hackenberg, Roland K Hartmann, Elena A Kubareva

Abstract read
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In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Involvement ofInternational journal of molecular sciences · 2022
    Article
  3. Article
  4. Ms1 RNA Interacts With the RNA Polymerase Core inFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Olga Y BureninaSkolkovo Institute of Science and Technology, Skolkovo, 143026, Russia. alunit@inbox.ru.
Daria A ElkinaChemistry Department and Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119991, Russia.
Anzhela Y MigurChemistry Department and Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119991, Russia.
Tatiana S OretskayaChemistry Department and Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119991, Russia.
Elena Evguenieva-HackenbergInstitute of Microbiology and Molecular Biology, Justus-Liebig-University, Giessen, 35390, Germany.
Roland K HartmannInstitute of Pharmaceutical Chemistry, Philipps-University Marburg, Marburg, 35037, Germany.
Elena A KubarevaChemistry Department and Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119991, Russia.
Lomonosov Moscow State University · RUPhilipps University of Marburg · DESkolkovo Institute of Science and Technology · RUUniversity of Freiburg · DEUniversity of Giessen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

6S RNA, a conserved and abundant small non-coding RNA found in most bacteria, regulates gene expression by inhibiting RNA polymerase (RNAP) holoenzyme. 6S RNAs from α-proteobacteria have been studied poorly so far. Here, we present a first in-depth analysis of 6S RNAs from two α-proteobacteria species, Bradyrhizobium japonicum and Sinorhizobium meliloti. Although both belong to the order Rhizobiales and are typical nitrogen-fixing symbionts of legumes, their 6S RNA expression profiles were found to differ: B. japonicum 6S RNA accumulated in the stationary phase, thus being reminiscent of Escherichia coli 6S RNA, whereas S. meliloti 6S RNA level peaked at the transition to the stationary phase, similarly to Rhodobacter sphaeroides 6S RNA. We demonstrated in vitro that both RNAs have hallmarks of 6S RNAs: they bind to the σ

Indexed as

BradyrhizobiumDNA-Directed RNA PolymerasesGene Expression Regulation, BacterialNucleic Acid ConformationProtein BindingRNA, BacterialRNA StabilityRNA, UntranslatedSinorhizobium melilotiTranscription, Genetic6S RNADNA-Directed RNA PolymerasesRNA, BacterialRNA polymerase omega subunitRNA, Untranslated6S RNApRNA transcriptsmall non-coding RNAtranscription

Identifiers

PMID33125669
OpenAlexW3094971448

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.