Evidence map›Paper›PMID 33125616›Full record

ReviewTherapeutic innovation & regulatory science2021

Text Classification for Clinical Trial Operations: Evaluation and Comparison of Natural Language Processing Techniques.

Emma Richard, Bhargava Reddy

Abstract readReview
PubMed Publisher
In one paragraph

Review in Therapeutic innovation & regulatory science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Emma RichardJanssen Research & Development, LLC, 1400 McKean Rd, Spring House, PA, 19477, USA. ERicha19@its.jnj.com.ORCID 0000-0001-5895-1421
Bhargava ReddyJanssen Research & Development, LLC, 1400 McKean Rd, Spring House, PA, 19477, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to detect patterns and trends across protocol deviations (PDs) is key to ensure high data quality and sufficient oversight of patient safety. In clinical trial operations, some business processes and work instructions limit efficient protocol deviation trending because a majority of protocol deviations are left unclassified. When this occurs, it restricts clinical teams from determining systemic issues or signals in the data. The unstructured text in protocol deviation descriptions is an important component of trial operation knowledge. Natural language processing (NLP) can make protocol deviation descriptions more accessible and can support information extraction and trending analysis. This paper reviews how the natural language processing techniques of Term-Frequency Inverse-Document-Frequency (TF-IDF) combined with the supervised machine learning model of Support Vector Machines (SVM) and word embedding approaches such as word2vec can be used to categorize/label protocol deviations across multiple therapeutic areas. NLP is a key tool that will lead to more data driven decisions in clinical trial operations.

Indexed as

Natural Language ProcessingHumansClinical trial operationsNatural language processingProtocol deviationsTerm frequency inverse document frequencyWord2vec

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.