Evidence map›Paper›PMID 33124554›Full record

ArticleEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin2020

Retrospective analysis on confirmation rates for referred positive rotavirus samples in England, 2016 to 2017: implications for diagnosis and surveillance.

Cristina C Celma, Stuart Beard, Amy Douglas, Shan Wong, Nana-Kwame Osafo, Matthew Hannah, Ashleigh Hale, Gabrielle Huggins, Shamez Ladhani, Jake Dunning

Open access · diamondAbstract read
In one paragraph

Article in Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. The cat is out of the bag - point-of-care testing (POCT) is here to stay.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Cristina C CelmaEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Stuart BeardEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Amy DouglasGastrointestinal Pathogens Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Shan WongEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Nana-Kwame OsafoEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Matthew HannahHigh Containment Microbiology, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Ashleigh HaleEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Gabrielle HugginsEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Shamez LadhaniImmunisations and Countermeasures, National Infection Service, Public Health England, London, United Kingdom.
Jake DunningEnteric Virus Unit, National Infection Service Laboratories, Public Health England, London, United Kingdom.
Public Health England · GB

Funding

Medical Research Council MR/R015600/1
6 · The paper itself

Abstract

BackgroundRapid diagnostic tests are commonly used by hospital laboratories in England to detect rotavirus (RV), and results are used to inform clinical management and support national surveillance of the infant rotavirus immunisation programme since 2013. In 2017, the Public Health England (PHE) national reference laboratory for enteric viruses observed that the presence of RV could not be confirmed by PCR in a proportion of RV-positive samples referred for confirmatory detection.AimWe aimed to compare the positivity rate of detection methods used by hospital laboratories with the PHE confirmatory test rate.MethodsRotavirus specimens testing positive at local hospital laboratories were re-tested at the PHE national reference laboratory using a PCR test. Confirmatory results were compared to original results from the PHE laboratory information management system.ResultsHospital laboratories screened 70.1% (2,608/3,721) of RV samples using immunochromatographic assay (IC) or rapid tests, 15.5% (578/3,721) using enzyme immunoassays (EIA) and 14.4% (535/3,721) using PCR. Overall, 1,011/3,721 (27.2%) locally RV-positive samples referred to PHE in 2016 and 2017 failed RV detection using the PHE reference laboratory PCR test. Confirmation rates were 66.9% (1,746/2,608) for the IC tests, 87.4% (505/578) for the EIA and 86.4% (465/535) for the PCR assays. Seasonal confirmation rate discrepancies were also evident for IC tests.ConclusionsThis report highlights high false positive rates with the most commonly used RV screening tests and emphasises the importance of implementing verified confirmatory tests for RV detections. This has implications for clinical diagnosis and national surveillance.

Indexed as

Public Health SurveillanceRotavirusRotavirus InfectionsEnglandHumansInfantRetrospective Studiesdiagnosisrapid testRotavirusscreeningsurveillance

Identifiers

PMID33124554
PMCPMC7596921
OpenAlexW3097293936

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.