Evidence map›Paper›PMID 33123748›Full record

ArticleExtremophiles : life under extreme conditions2021

Mechanism of TonB-dependent transport system in Halomonas alkalicola CICC 11012s in response to alkaline stress.

Lei Zhai, Jiuyan Xie, Huijun Feng, Sijia Sun, Kun Cheng, Su Yao

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Article in Extremophiles : life under extreme conditions, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Lei ZhaiChina Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Building 6, No. 24 Yard, Jiuxianqiao Middle Road, Chaoyang District, Beijing, China.
Jiuyan XieChina Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Building 6, No. 24 Yard, Jiuxianqiao Middle Road, Chaoyang District, Beijing, China.
Huijun FengChina Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Building 6, No. 24 Yard, Jiuxianqiao Middle Road, Chaoyang District, Beijing, China.
Sijia SunChina Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Building 6, No. 24 Yard, Jiuxianqiao Middle Road, Chaoyang District, Beijing, China.
Kun ChengChina Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Building 6, No. 24 Yard, Jiuxianqiao Middle Road, Chaoyang District, Beijing, China.
Su YaoChina Center of Industrial Culture Collection (CICC), China National Research Institute of Food and Fermentation Industries, Building 6, No. 24 Yard, Jiuxianqiao Middle Road, Chaoyang District, Beijing, China. milly@china-cicc.org.
China National Research Institute of Food and Fermentation · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Halomonas alkalicola CICC 11012s can grow at pH 12.5, the highest pH at which the organisms in the genus Halomonas can grow. Genomic analysis reveals that H. alkalicola adapts to alkaline stress using a variety of adaptive strategies; however, the detailed mechanism for its growth at high-alkaline conditions has not been elucidated. Therefore, in this study, the adaptations of H. alkalicola in response to extreme alkaline stress were investigated. A sharp decrease of alkaliphilic tolerance was observed in mutants E. coli ΔEctonB and H. alkalicola ΔHatonB. Expressions of the gene clusters encoding TonB-dependent transport system and iron complex transport system in H. alkalicola grown under extreme alkaline conditions were markedly up-regulated. We then compared the intracellular ionic iron content and iron-chelating ability of mutant strain with those of wild-type strain to understand the influence of TonB-dependent transport system on the alkaline responses. The results indicated that the presence of TonB-dependent transport system increased the alkaline tolerance of H. alkalicola grown at high-alkaline conditions, but had no effects when the strain was grown at neutral pH and low-alkaline conditions. Meanwhile, the presence of this system increased the transport and accumulation of ionic irons to maintain intracellular metabolic homeostasis, which in turn could increase the tolerance of the strain to extreme alkaline conditions. Based on the results, we established a model representing the interactions between TonB-dependent transport system, alkaline tolerance, and intracellular ionic iron that could help deepen the understanding of the alkaline response mechanism of alkaliphilic bacteria.

Indexed as

Stress, PhysiologicalAlkaliesBacterial ProteinsBiological TransportEscherichia coliHalomonasHydrogen-Ion ConcentrationIronMembrane ProteinsAlkaliesBacterial ProteinsIronMembrane ProteinstonB protein, BacteriaAlkaline response mechanismHalomonas alkalicolaIronTonB-dependent transport system

Identifiers

PMID33123748
OpenAlexW3096231152

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.