Evidence map›Paper›PMID 33123135›Full record

ReviewFrontiers in immunology2020

New Immunoinformatics Tools for Swine: Designing Epitope-Driven Vaccines, Predicting Vaccine Efficacy, and Making Vaccines on Demand.

Lenny Moise, Andres H Gutiérrez, Sundos Khan, Swan Tan, Matt Ardito, William D Martin, Anne S De Groot

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Speculative Review on the Feasibility of Porcine Circovirus 2 Elimination.Animals : an open access journal from MDPI · 2025
    Review
  3. Article
  4. Immunopeptidomics ofBiology · 2024
    Article
  5. Article
  6. In silico designing of multi-epitope vaccine against canine parvovirus using reverse vaccinology.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Lenny MoiseEpiVax, Inc., Providence, RI, United States.
Andres H GutiérrezEpiVax, Inc., Providence, RI, United States.
Sundos KhanEpiVax, Inc., Providence, RI, United States.
Swan TanCenter for Vaccines and Immunology, University of Georgia, Athens, GA, United States.
Matt ArditoEpiVax, Inc., Providence, RI, United States.
William D MartinEpiVax, Inc., Providence, RI, United States.
Anne S De GrootEpiVax, Inc., Providence, RI, United States.
Providence College · USUniversity of Georgia · USEpiVax (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Novel computational tools for swine vaccine development can expand the range of immunization approaches available to prevent economically devastating swine diseases and spillover events between pigs and humans. PigMatrix and EpiCC are two new tools for swine T cell epitope identification and vaccine efficacy analysis that have been integrated into an existing computational vaccine design platform named iVAX. The iVAX platform is already in use for the development of human vaccines, thus integration of these tools into iVAX improves and expands the utility of the platform overall by making previously validated immunoinformatics tools, developed for humans, available for use in the design and analysis of swine vaccines. PigMatrix predicts T cell epitopes for a broad array of class I and class II swine leukocyte antigen (SLA) using matrices that enable the scoring of sequences for likelihood of binding to SLA. PigMatrix facilitates the prospective selection of T cell epitopes from the sequences of swine pathogens for vaccines and permits the comparison of those predicted epitopes with "self" (the swine proteome) and with sequences from other strains. Use of PigMatrix with additional tools in the iVAX toolkit also enables the computational design of vaccines

Indexed as

Immunogenicity, VaccineAfrican Swine FeverAnimalsAsfarviridaeComputational BiologyComputer SimulationEpitopes, T-LymphocyteHistocompatibility Antigens Class IInfluenza VaccinesOrthomyxoviridaeOrthomyxoviridae InfectionsSwineSwine DiseasesVaccinationEpitopes, T-LymphocyteHistocompatibility Antigens Class IInfluenza Vaccinesswine leukocyte antigenepitopeimmunityimmunoinformaticsinfectious diseaseSLAswineT cellvaccine

Identifiers

PMID33123135
PMCPMC7571332
OpenAlexW3092240197

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.