Evidence map›Paper›PMID 33122772›Full record

ArticleScientific reports2020

QTL detection and putative candidate gene prediction for leaf rolling under moisture stress condition in wheat.

Aakriti Verma, M Niranjana, S K Jha, Niharika Mallick, Priyanka Agarwal, Vinod

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Dissection of QTLs underlying the genetic basis of drought resistance in wheat: a meta-analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Breaking the association between gametocidal gene(s) and leaf rust resistance gene (Molecular breeding : new strategies in plant improvement · 2024
    Article
  6. Article
  7. Characterization and Mapping of a Rolling Leaf Mutant AlleleInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Leaf rolling in bread wheat (Frontiers in plant science · 2022
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Aakriti VermaDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
M NiranjanaDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
S K JhaDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Niharika MallickDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Priyanka AgarwalDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
VinodDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. vinod.genetics@gmail.com.
Indian Agricultural Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leaf rolling is an important mechanism to mitigate the effects of moisture stress in several plant species. In the present study, a set of 92 wheat recombinant inbred lines derived from the cross between NI5439 × HD2012 were used to identify QTLs associated with leaf rolling under moisture stress condition. Linkage map was constructed using Axiom 35 K Breeder's SNP Array and microsatellite (SSR) markers. A linkage map with 3661 markers comprising 3589 SNP and 72 SSR markers spanning 22,275.01 cM in length across 21 wheat chromosomes was constructed. QTL analysis for leaf rolling trait under moisture stress condition revealed 12 QTLs on chromosomes 1B, 2A, 2B, 2D, 3A, 4A, 4B, 5D, and 6B. A stable QTL Qlr.nhv-5D.2 was identified on 5D chromosome flanked by SNP marker interval AX-94892575-AX-95124447 (5D:338665301-5D:410952987). Genetic and physical map integration in the confidence intervals of Qlr.nhv-5D.2 revealed 14 putative candidate genes for drought tolerance which was narrowed down to six genes based on in-silico analysis. Comparative study of leaf rolling genes in rice viz., NRL1, OsZHD1, Roc5, and OsHB3 on wheat genome revealed five genes on chromosome 5D. Out of the identified genes, TraesCS5D02G253100 falls exactly in the QTL Qlr.nhv-5D.2 interval and showed 96.9% identity with OsZHD1. Two genes similar to OsHB3 viz. TraesCS5D02G052300 and TraesCS5D02G385300 exhibiting 85.6% and 91.8% identity; one gene TraesCS5D02G320600 having 83.9% identity with Roc5 gene; and one gene TraesCS5D02G102600 showing 100% identity with NRL1 gene were also identified, however, these genes are located outside Qlr.nhv-5D.2 interval. Hence, TraesCS5D02G253100 could be the best potential candidate gene for leaf rolling and can be utilized for improving drought tolerance in wheat.

Indexed as

Genes, PlantQuantitative Trait LociStress, PhysiologicalWaterDroughtsPlant LeavesTriticumWater

Identifiers

PMID33122772
PMCPMC7596552
OpenAlexW3097451254

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.