Evidence map›Paper›PMID 33122649›Full record

ArticleNature communications2020

Engineered fluoride sensitivity enables biocontainment and selection of genetically-modified yeasts.

Justin I Yoo, Susanna Seppälä, Michelle A OʼMalley

Abstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Fluoride triggers lysis inProceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Justin I YooDepartment of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, 93106, USA.
Susanna SeppäläDepartment of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, 93106, USA.ORCID 0000-0002-2983-3669
Michelle A OʼMalleyDepartment of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, 93106, USA. momalley@ucsb.edu.ORCID 0000-0002-6065-8491

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biocontainment systems are needed to neutralize genetically modified organisms (GMOs) that pose ecological threats outside of controlled environments. In contrast, benign selection markers complement GMOs with reduced fitness. Benign selection agents serve as alternatives to antibiotics, which are costly and risk spread of antibiotic resistance. Here, we present a yeast biocontainment strategy leveraging engineered fluoride sensitivity and DNA vectors enabling use of fluoride as a selection agent. The biocontainment system addresses the scarcity of platforms available for yeast despite their prevalent use in industry and academia. In the absence of fluoride, the biocontainment strain exhibits phenotypes nearly identical to those of the wildtype strain. Low fluoride concentrations severely inhibit biocontainment strain growth, which is restored upon introduction of fluoride-based vectors. The biocontainment strategy is stringent, easily implemented, and applicable to several eukaryotes. Further, the DNA vectors enable genetic engineering at reduced costs and eliminate risks of propagating antibiotic resistance.

Indexed as

FluoridesSelection, GeneticGenetic EngineeringGenetic MarkersMembrane ProteinsOrganisms, Genetically ModifiedSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSynthetic BiologyFex1 protein, S cerevisiaeFluoridesGenetic MarkersMembrane ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID33122649
PMCPMC7596524

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.