Evidence map›Paper›PMID 33121542›Full record

ArticleMicrobiome2020

Molecular repertoire of Deinococcus radiodurans after 1 year of exposure outside the International Space Station within the Tanpopo mission.

Emanuel Ott, Yuko Kawaguchi, Denise Kölbl, Elke Rabbow, Petra Rettberg, Maximilian Mora, Christine Moissl-Eichinger, Wolfram Weckwerth, Akihiko Yamagishi, Tetyana Milojevic

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in Microbiome, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
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  3. Diallyl disulfide reduces oxidative stress to mitigate uranium tailings radiation-induced damage to the hematopoietic system.Strahlentherapie und Onkologie : Organ der Deutschen Rontgengesellschaft ... [et al] · 2026
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  7. Review
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  12. Towards improved biofilm models.Nature reviews. Microbiology · 2025
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Extremophiles in Space Exploration.Indian journal of microbiology · 2024
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Emanuel OttSpace Biochemistry Group, Department of Biophysical Chemistry, University of Vienna, Vienna, Austria.
Yuko KawaguchiPlanetary Exploration Research Center (PERC), Chiba Institute of Technology (CIT), Chiba, Japan.
Denise KölblSpace Biochemistry Group, Department of Biophysical Chemistry, University of Vienna, Vienna, Austria.
Elke RabbowInstitute of Aerospace Medicine, Radiation Biology Department, German Aerospace Center, Cologne, Germany.
Petra RettbergInstitute of Aerospace Medicine, Radiation Biology Department, German Aerospace Center, Cologne, Germany.
Maximilian MoraDepartment of Internal Medicine, Section of Infectious Diseases and Tropical Medicine, Medical University Graz, Graz, Austria.
Christine Moissl-EichingerDepartment of Internal Medicine, Section of Infectious Diseases and Tropical Medicine, Medical University Graz, Graz, Austria.
Wolfram WeckwerthDepartment of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria.
Akihiko YamagishiDepartment of Life Science, Tokyo Institute of Technology, Nagatsuta, Yokohama, Japan.
Tetyana MilojevicSpace Biochemistry Group, Department of Biophysical Chemistry, University of Vienna, Vienna, Austria. tetyana.milojevic@univie.ac.at.ORCID 0000-0001-8415-1890
University of Vienna · ATDeutsches Zentrum für Luft- und Raumfahrt e. V. (DLR) · DEMedical University of Graz · ATChiba Institute of Technology · JPTokyo Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe extraordinarily resistant bacterium Deinococcus radiodurans withstands harsh environmental conditions present in outer space. Deinococcus radiodurans was exposed for 1 year outside the International Space Station within Tanpopo orbital mission to investigate microbial survival and space travel. In addition, a ground-based simulation experiment with conditions, mirroring those from low Earth orbit, was performed.

methodsWe monitored Deinococcus radiodurans cells during early stage of recovery after low Earth orbit exposure using electron microscopy tools. Furthermore, proteomic, transcriptomic and metabolomic analyses were performed to identify molecular mechanisms responsible for the survival of Deinococcus radiodurans in low Earth orbit.

resultsD. radiodurans cells exposed to low Earth orbit conditions do not exhibit any morphological damage. However, an accumulation of numerous outer-membrane-associated vesicles was observed. On levels of proteins and transcripts, a multi-faceted response was detected to alleviate cell stress. The UvrABC endonuclease excision repair mechanism was triggered to cope with DNA damage. Defense against reactive oxygen species is mirrored by the increased abundance of catalases and is accompanied by the increased abundance of putrescine, which works as reactive oxygen species scavenging molecule. In addition, several proteins and mRNAs, responsible for regulatory and transporting functions showed increased abundances. The decrease in primary metabolites indicates alternations in the energy status, which is needed to repair damaged molecules.

conclusionLow Earth orbit induced molecular rearrangements trigger multiple components of metabolic stress response and regulatory networks in exposed microbial cells. Presented results show that the non-sporulating bacterium Deinococcus radiodurans survived long-term low Earth orbit exposure if wavelength below 200 nm are not present, which mirrors the UV spectrum of Mars, where CO

Indexed as

AcclimatizationMicrobial ViabilitySpacecraftSpace FlightDeinococcusDNA DamageInternational CooperationMetabolomicsProteomicsReactive Oxygen SpeciesTime FactorsTranscriptomeUltraviolet RaysReactive Oxygen SpeciesDeinococcus radioduransLow earth orbitMetabolomicsMolecular stress responseProteomicsTranscriptomics

Identifiers

PMID33121542
PMCPMC7597052
OpenAlexW3096524426

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.