Evidence map›Paper›PMID 33121183›Full record

ArticlePlants (Basel, Switzerland)2020

Identification, Characterization, and Mutational Analysis of a Probable KEAP1 Ortholog in Rice (

Yan-Hua Liu, Meng Jiang, Rui-Qing Li, Rasbin Basnet, Jian-Zhong Huang, Shi-Yong Song, Qing-Yao Shu

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yan-Hua LiuNational Key Laboratory of Rice Biology and Zhejiang Key Laboratory of Crop Germplasm Resources, Institute of Crop Sciences, Zhejiang University, Hangzhou 310058, China.
Meng JiangNational Key Laboratory of Rice Biology and Zhejiang Key Laboratory of Crop Germplasm Resources, Institute of Crop Sciences, Zhejiang University, Hangzhou 310058, China.
Rui-Qing LiCollege of Agronomy, Anhui Agricultural University, Hefei 230036, China.
Rasbin BasnetNational Key Laboratory of Rice Biology and Zhejiang Key Laboratory of Crop Germplasm Resources, Institute of Crop Sciences, Zhejiang University, Hangzhou 310058, China.
Jian-Zhong HuangNational Key Laboratory of Rice Biology and Zhejiang Key Laboratory of Crop Germplasm Resources, Institute of Crop Sciences, Zhejiang University, Hangzhou 310058, China.
Shi-Yong SongNational Key Laboratory of Rice Biology and Zhejiang Key Laboratory of Crop Germplasm Resources, Institute of Crop Sciences, Zhejiang University, Hangzhou 310058, China.
Qing-Yao ShuNational Key Laboratory of Rice Biology and Zhejiang Key Laboratory of Crop Germplasm Resources, Institute of Crop Sciences, Zhejiang University, Hangzhou 310058, China.
Institute of Crop Sciences · CNAnhui Agricultural University · CNMinistry of Agriculture and Rural Affairs · CN

Funding

International Atomic Energy Agency D23032, contract No. 23042National Key Research and Development Program of China Stem Cell and Translational Research 2016YFD0102103
6 · The paper itself

Abstract

The Kelch-like ECH-associated protein 1 (KEAP1)-nuclear factor E2-related factor 2 (NRF2) module is a key component in the detoxification and antioxidant system in animals, which plays crucial roles in cell homeostasis and cytoprotection, and consequently in carcinogenesis and disease development. However, this system seems to have diverged throughout evolution across different organisms, and the question of whether a similar system exists in plants has thus far remained unresolved. In this study, a KEAP1 ortholog was identified in rice (Oryza sativa L., OsKEAP1) and its properties were characterized via in silico and laboratory studies. To reveal OsKEAP1's function, two knockdown mutants, oskeap1-1 and oskeap1-2, were generated by targeted mutagenesis in the 5' untranslated region (UTR) using the CRISPR-Cas9 system. In silico analysis showed that OsKEAP1 has a Kelch-repeat domain which is identical to those of animals and a plant-specific development and cell death (DCD) domain in place of the broad-complex, tramtrack, bric-a-brac (BTB) domain found in animals. Orthologs of OsKEAP1 are present across plant species and all have the DCD domain and the Kelch-repeat domain. OsKEAP1 was proven to be localized to both the cytoplasm and nucleus, in contrast to the exclusive cytoplasm localization of animal KEAP1. Single nucleotide insertions in the 5' UTR significantly reduced the transcription level of OsKEAP1 in the oskeap1-1 and oskeap1-2 mutants. The oskeap1 mutations greatly impaired plant growth and development, resulting in significant declines in a majority of agronomic and yield-related traits, i.e., plant height, panicle length, grain number per plant, and seed-set rate. The downregulation of OsKEAP1 increased the levels of H

Indexed as

abscisic acid (ABA)CRISPROryza sativa L.Os01g0162500Os05g0164900OsKEAP1redoxseed germination

Identifiers

PMID33121183
PMCPMC7716215
OpenAlexW3095041019

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.