ArticlePloS one2020
Transcriptome analysis reveals Nitrogen deficiency induced alterations in leaf and root of three cultivars of potato (Solanum tuberosum L.).
Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed, 69 citations in OpenAlex.
- Interspecific allelopathy suppresses potato cyst nematodes by 1-decanol derived from Houttuyniacordata.Plant communications · 2026Article
- Integrated physiological, biochemical and transcriptomic analyses elucidate the response of alpine plant Lamiophlomis rotata (Benth.) Kudo to Low-Nitrogen stress.BMC plant biology · 2025Article
- Ecofriendly strategy based on the combination of inoculation with plant growth-promoting bacteria and reduced nitrate doses boosts the valorization of purple cauliflowers.Frontiers in plant science · 2025Article
- StCDF1: A 'jack of all trades' clock output with a central role in regulating potato nitrate reduction activity.The New phytologist · 2025Article
- Article
- Transcriptomics in solanaceous crop improvement: advances and opportunities.Frontiers in plant science · 2025Review
- Potato: from functional genomics to genetic improvement.Molecular horticulture · 2024Review
- Transcriptome Profiling Reveals the Gene Network Responding to Low Nitrogen Stress in Wheat.Plants (Basel, Switzerland) · 2024Article
- An Integrated Analysis of Metabolome, Transcriptome, and Physiology Revealed the Molecular and Physiological Response ofPlants (Basel, Switzerland) · 2023Article
- Comparative Transcriptomic Analysis Reveals the Negative Response Mechanism of Peanut Root Morphology and Nitrate Assimilation to Nitrogen Deficiency.Plants (Basel, Switzerland) · 2023Article
- Review
- Short-term transcriptomic analysis at organ scale reveals candidate genes involved in low N responses in NUE-contrasting tomato genotypes.Frontiers in plant science · 2023Article
- Screening of differentially expressed microRNAs and target genes in two potato varieties under nitrogen stress.BMC plant biology · 2022Article
- Comparison of single-trait and multi-trait genomic predictions on agronomic and disease resistance traits in spring wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Identification of Spring Wheat with Superior Agronomic Performance under Contrasting Nitrogen Managements Using Linear Phenotypic Selection Indices.Plants (Basel, Switzerland) · 2022Article
- Transcriptome analysis reveals multiple effects of nitrogen accumulation and metabolism in the roots, shoots, and leaves of potato (Solanum tuberosum L.).BMC plant biology · 2022Article
- Genome-based prediction of agronomic traits in spring wheat under conventional and organic management systems.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
- Germplasm, Breeding, and Genomics in Potato Improvement of Biotic and Abiotic Stresses Tolerance.Frontiers in plant science · 2022Review
- Physical mapping of QTL associated with agronomic and end-use quality traits in spring wheat under conventional and organic management systems.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Transcriptome sequencing of wild soybean revealed gene expression dynamics under low nitrogen stress.Journal of applied genetics · 2021Article
Corrections and comments
- Erratum issued
Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Nitrogen (N) is a key element for the production of potato. The N uptake efficiency, N use efficiency and increased N utilization efficiency can be decreased by N deficiency treatment. We performed this study to investigate the association between transcriptomic profiles and the efficiencies of N in potato. Potato cultivars "Yanshu 4" (short for Y), "Xiabodi" (cv. Shepody, short for X) and "Chunshu 4" (short for C) were treated with sufficient N fertilizer and deficient N fertilizer. Then, the growth parameters and tuber yield were recorded; the contents of soluble sugar and protein were measured; and the activities of enzymes were detected. Leaf and root transcriptomes were analyzed and differentially expressed genes (DEGs) in response to N deficiency were identified. The results showed that N deficiency decreased the nitrate reductase (NR), glutamine synthetase (GS) and root activity. Most of the DEGs between N-treated and N-deficiency participate the processes of transport, nitrate transport, nitrogen compound transport and N metabolism in C and Y, not in X, indicating the cultivar-dependent response to N deficiency. DEGs like glutamate dehydrogenase (StGDH), glutamine synthetase (StGS) and carbonic anhydrase (StCA) play key roles in these processes mentioned above. DEGs related to N metabolism showed a close relationship with the N utilization efficiency (UTE), but not with N use efficiency (NUE). The Major Facilitator Superfamily (MFS) members, like nitrate transporter 2.4 (StNRT2.4), 2.5 (StNRT2.5) and 2.7 (StNRT2.7), were mainly enriched in the processes associated with response to stresses and defense, indicating that N deficiency induced stresses in all cultivars.
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