Evidence map›Paper›PMID 33119405›Full record

ArticleClinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis

Gene Variants Associated With Venous Thrombosis: A Replication Study in a Brazilian Multicentre Study.

Anna Virgínia Calazans Romano, Aline Barnabé, Telma Barbosa Gadelha, João Carlos de Campos Guerra, Rodrigo Secolin, Fernanda Loureiro de Andrade Orsi, Gizele de Castro Sousa Campanate, Nelson Wolosker, Joyce Maria Annichino-Bizzacchi

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Anna Virgínia Calazans RomanoHematology and Hemotherapy Center, 28132University of Campinas (UNICAMP), Campinas, Sao Paulo, Brazil.ORCID https://orcid.org/0000-0002-5729-5271
Aline BarnabéHematology and Hemotherapy Center, 28132University of Campinas (UNICAMP), Campinas, Sao Paulo, Brazil.
Telma Barbosa GadelhaHematology, 28125Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
João Carlos de Campos GuerraClinical Pathology, Israelite Hospital Albert Einstein, São Paulo, Brazil.
Rodrigo SecolinHematology and Hemotherapy Center, Faculty of Medical Sciences, 28132University of Campinas-Unicamp, Campinas, Brazil.
Fernanda Loureiro de Andrade OrsiHematology and Hemotherapy Center, 28132University of Campinas (UNICAMP), Campinas, Sao Paulo, Brazil.
Gizele de Castro Sousa CampanateHematology, 28125Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.
Nelson WoloskerVascular Surgery, Israelite Hospital Albert Einstein, São Paulo, Brazil.
Joyce Maria Annichino-BizzacchiHematology and Hemotherapy Center, 28132University of Campinas (UNICAMP), Campinas, Sao Paulo, Brazil.
Universidade Estadual de Campinas (UNICAMP) · BRHospital Israelita Albert Einstein · BRUniversidade Federal do Rio de Janeiro · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single nucleotide polymorphisms (SNP) associated with Venous Thromboembolism (VTE) risk have been identified in European and American populations. Replicate SNPs associated with VTE in a Brazilian multicenter case-control study of the Southeast region. Patients with previous VTE assisted at the Outpatient Clinics of 3 centers of the Southeast Brazilian region were compared to normal controls of the same geographic region. We evaluated 29 SNPs associated with VTE risk in other populations, and 90 SNPs for stratification analysis of the population. Due to high admixture of Brazilian population and lack of previous studies, the calculation of the sample power was performed after genotyping. Sample size, allelic frequency and Hardy-Weinberg equilibrium were estimated. The association and odds ratio analyses were estimated by logistic regression and the results were adjusted for multiple tests using Bonferroni correction. The evaluation of the genetic structure similarity in the cases and controls was performed by AMOVA. 436 cases and 430 controls were included. It was demonstrated that this sample has a statistical power to detect a genetic association of 79.4%. AMOVA showed that the genetic variability between groups was 0.0% and 100% within each group. None of the SNPs showed association with VTE in our population. A Brazilian multicenter case-control study with adequate sample power, high genetic variability though no stratification between groups, showed no replication of SNPs associated with VTE. The high admixture of Brazilian population may be responsible for these results, emphasizing the influence of the population genetic structure in association studies.

Indexed as

Polymorphism, Single NucleotideAdultBrazilCase-Control StudiesFemaleGenetic Predisposition to DiseaseGenetic VariationHumansMaleMiddle AgedRisk FactorsVenous ThrombosisYoung Adultgenetic associationGWASpulmonary embolismsingle nucleotide polymorphismSNPTEVthrombosisvenous thromboembolism

Identifiers

PMID33119405
PMCPMC7607786
OpenAlexW3096780900

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.