Evidence map›Paper›PMID 33119282›Full record

ArticleJournal of medicinal chemistry2020

Proposed Allosteric Inhibitors Bind to the ATP Site of CK2α.

Paul Brear, Darby Ball, Katherine Stott, Sheena D'Arcy, Marko Hyvönen

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Advances in pyrazolo[1,5-RSC advances · 2025
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Crystal structure of the Rho-associated coiled-coil kinase 2 inhibitor belumosudil bound to CK2α.Acta crystallographica. Section F, Structural biology communications · 2022
    Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Paul BrearDepartment of Biochemistry, University of Cambridge, Cambridge CB2 1GA, U.K.
Darby BallDepartment of Chemistry and Biochemistry, The University of Texas at Dallas, Richardson, Texas 75080, United States.
Katherine StottDepartment of Biochemistry, University of Cambridge, Cambridge CB2 1GA, U.K.
Sheena D'ArcyDepartment of Chemistry and Biochemistry, The University of Texas at Dallas, Richardson, Texas 75080, United States.ORCID 0000-0001-5055-988X
Marko HyvönenDepartment of Biochemistry, University of Cambridge, Cambridge CB2 1GA, U.K.ORCID 0000-0001-8683-4070
University of Cambridge · GBThe University of Texas at Dallas · US

Funding

The Role of Dynamics in Regulating Multi-Activity Protein Complexes and ChromatinR35GM133751 · NIGMS · UNIVERSITY OF TEXAS DALLAS · PI Sheena D'Arcy · 2019 to 2026
$2.9M
NIGMS NIH HHS R35 GM133751
6 · The paper itself

Abstract

CK2α is a ubiquitous, well-studied kinase that is a target for small-molecule inhibition, for treatment of cancers. While many different classes of adenosine 5'-triphosphate (ATP)-competitive inhibitors have been described for CK2α, they tend to suffer from significant off-target activity and new approaches are needed. A series of inhibitors of CK2α has recently been described as allosteric, acting at a previously unidentified binding site. Given the similarity of these inhibitors to known ATP-competitive inhibitors, we have investigated them further. In our thorough structural and biophysical analyses, we have found no evidence that these inhibitors bind to the proposed allosteric site. Rather, we report crystal structures, competitive isothermal titration calorimetry (ITC) and NMR, hydrogen-deuterium exchange (HDX) mass spectrometry, and chemoinformatic analyses that all point to these compounds binding in the ATP pocket. Comparisons of our results and experimental approach with the data presented in the original report suggest that the primary reason for the disparity is nonspecific inhibition by aggregation.

Indexed as

Adenosine TriphosphateAllosteric RegulationAllosteric SiteBinding, CompetitiveCasein Kinase IICrystallography, X-RayDeuterium Exchange MeasurementHumansLigandsMolecular Dynamics SimulationNaphthyridinesNuclear Magnetic Resonance, BiomolecularPhenazinesProtein BindingProtein Kinase InhibitorsRecombinant ProteinsAdenosine TriphosphateCasein Kinase IICSNK2A1 protein, humanLigandsNaphthyridinesPhenazinesProtein Kinase InhibitorsRecombinant Proteinssilmitasertib

Identifiers

PMID33119282
PMCPMC7666092
OpenAlexW3097477146

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.