Evidence map›Paper›PMID 33118316›Full record

ArticleMolecular genetics & genomic medicine2020

FANCM c5791C>T stopgain mutation (rs144567652) is a familial colorectal cancer risk factor.

Lisa A Cannon-Albright, Craig C Teerlink, Jeffrey Stevens, Angela K Snow, Bryony A Thompson, Russell Bell, Kim N Nguyen, Nykole R Sargent, Wendy K Kohlmann, Deborah W Neklason and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. A Rare Variant inCancers · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Lisa A Cannon-AlbrightDivision of Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID 0000-0003-2602-3668
Craig C TeerlinkDivision of Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT, USA.ORCID 0000-0002-1992-2326
Jeffrey StevensDivision of Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT, USA.
Angela K SnowHuntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA.ORCID 0000-0002-7033-2583
Bryony A ThompsonHuntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA.ORCID 0000-0001-8655-1839
Russell BellHuntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA.
Kim N NguyenDivision of Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT, USA.
Nykole R SargentHuntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA.
Wendy K KohlmannHuntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA.
Deborah W NeklasonDivision of Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT, USA.
Sean V TavtigianHuntsman Cancer Institute, University of Utah, Salt Lake City, UT, USA.ORCID 0000-0002-7543-8221
University of Utah · USThe Royal Melbourne Hospital · AU

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
Utah Center for Clinical and Translational ScienceUL1TR002538 · NCATS · UNIVERSITY OF UTAH · PI HESS, RACHEL, MAJERSIK, JENNIFER JUHL · 2018 to 2022
$26.0M
Massively Parallel Sequencing for Familial Colon Cancer GenesR01CA164138 · NCI · UNIVERSITY OF UTAH · PI ALBRIGHT, LISA CANNON, TAVTIGIAN, SEAN VAHRAM · 2012 to 2016
$2.9M
NCATS NIH HHS UL1 TR002538NCI NIH HHS P30 CA042014NCI NIH HHS R01 CA164138
6 · The paper itself

Abstract

purposeWhile familial aggregation of colorectal cancer (CRC) is recognized, the majority of the germline predisposition factors remain unidentified, and many high-risk CRC pedigrees remain unexplained by known risk variants. Fanconi Anemia genes have been recognized to be associated with cancer risk. Notably, FANCM (OMIM 609644) variants have been reported to confer risk for CRC and breast cancer.

methodsExome sequencing of CRC-affected cousins in a set of 47 independent extended high-risk CRC pedigrees identified a candidate set of rare, shared variants. Variants were tested for association with risk in 744 Utah CRC cases and 1525 controls, and for segregation with CRC in affected relatives.

resultsA FANCM stopgain variant was observed in two CRC-affected cousin pairs, each from an independent Utah high-risk pedigree, and yielded a nonsignificant, but elevated OR = 2.05 in a set of Utah cases and controls. Segregation of the variant to other related CRC-affected cases was observed in the two extended pedigrees.

conclusionA rare stopgain variant in FANCM (rs144567652) that is recognized as a breast cancer predisposition variant, and that has previously been proposed, but not confirmed, as a CRC predisposition variant, is validated here as a risk factor for familial CRC.

Indexed as

Polymorphism, Single NucleotideColorectal NeoplasmsDNA HelicasesHumansMutationPedigreeDNA HelicasesFANCM protein, humancolorectal cancerFANCMhigh-risk pedigreeUPDB

Identifiers

PMID33118316
PMCPMC7767553
OpenAlexW3094692159

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.