ArticleFrontiers in computational neuroscience2020
Identifiability of a Binomial Synapse.
Article in Frontiers in computational neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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7 citing papers in PubMed.
- A Fast Synaptic Parameter Estimation Method Based on First- and Second-Order Moments for Short-Term Facilitating Synapses.Biomedicines · 2026Article
- Efficient data collection for establishing practical identifiability via active learning.Computational and structural biotechnology journal · 2025Article
- Synapses learn to utilize stochastic pre-synaptic release for the prediction of postsynaptic dynamics.PLoS computational biology · 2024Article
- Estimation of cumulative amplitude distributions of miniature postsynaptic currents allows characterising their multimodality, quantal size and variability.Scientific reports · 2023Article
- Efficient sampling-based Bayesian Active Learning for synaptic characterization.PLoS computational biology · 2023Article
- Local connectivity and synaptic dynamics in mouse and human neocortex.Science (New York, N.Y.) · 2022Article
- Modeling the spread of fake news on Twitter.PloS one · 2021Article
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2 authors.
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Abstract
Synapses are highly stochastic transmission units. A classical model describing this stochastic transmission is called the binomial model, and its underlying parameters can be estimated from postsynaptic responses to evoked stimuli. The accuracy of parameter estimates obtained via such a model-based approach depends on the identifiability of the model. A model is said to be structurally identifiable if its parameters can be uniquely inferred from the distribution of its outputs. However, this theoretical property does not necessarily imply practical identifiability. For instance, if the number of observations is low or if the recording noise is high, the model's parameters can only be loosely estimated. Structural identifiability, which is an intrinsic property of a model, has been widely characterized; but practical identifiability, which is a property of both the model and the experimental protocol, is usually only qualitatively assessed. Here, we propose a formal definition for the practical identifiability domain of a statistical model. For a given experimental protocol, this domain corresponds to the set of parameters for which the model is correctly identified as the ground truth compared to a simpler alternative model. Considering a model selection problem instead of a parameter inference problem allows to derive a non-arbitrary criterion for practical identifiability. We apply our definition to the study of neurotransmitter release at a chemical synapse. Our contribution to the analysis of synaptic stochasticity is three-fold: firstly, we propose a quantitative criterion for the practical identifiability of a statistical model, and compute the identifiability domains of different variants of the binomial release model (uni or multi-quantal, with or without short-term plasticity); secondly, we extend the Bayesian Information Criterion (BIC), a classically used tool for model selection, to models with correlated data (which is the case for most models of chemical synapses); finally, we show that our approach allows to perform data free model selection, i.e., to verify if a model used to fit data was indeed identifiable even without access to the data, but having only access to the fitted parameters.
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