Evidence map›Paper›PMID 33115963›Full record

ArticleAging2020

Designing high affinity target-binding peptides to HLA-E: a key membrane antigen of multiple myeloma.

Ying Yang, Mingli Sun, Zhaojin Yu, Jinwei Liu, Wei Yan, Zhuogang Liu, Minjie Wei, Hongtao Wang

Open access · greenAbstract read
In one paragraph

Article in Aging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ying YangDepartment of Hematology, Shengjing Hospital of China Medical University, Shenyang, Liaoning, China.
Mingli SunDepartment of Pharmacology, School of Pharmacy, China Medical University, Shenyang, Liaoning, China.
Zhaojin YuDepartment of Pharmacology, School of Pharmacy, China Medical University, Shenyang, Liaoning, China.
Jinwei LiuDepartment of Pharmacology, School of Pharmacy, China Medical University, Shenyang, Liaoning, China.
Wei YanDepartment of Hematology, Shengjing Hospital of China Medical University, Shenyang, Liaoning, China.
Zhuogang LiuDepartment of Hematology, Shengjing Hospital of China Medical University, Shenyang, Liaoning, China.
Minjie WeiDepartment of Pharmacology, School of Pharmacy, China Medical University, Shenyang, Liaoning, China.
Hongtao WangDepartment of Hematology, Shengjing Hospital of China Medical University, Shenyang, Liaoning, China.
China Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multiple myeloma (MM) is a plasma cell malignancy that is currently incurable. Finding new targets and designing drugs are crucial for the treatment of MM. The two datasets (GSE6691 and GSE39754) are used to screen highly expressed antigen on MM cells. HLA-E was an ideal target for it was a hub gene, and also located in one of the key clusters. Highly expression of HLA-E mRNA on MM cells was also confirmed by real-time qPCR testing the MM patients' samples in Shengjing hospital. Crystal structure of HLA-E was obtained from Protein Data Bank (PDB ID: 3CDG) which was used to design targeting peptides with Molecular Operating Environment software. By analyzing interaction between CD94/NKG2A and HLA-E, a peptide with twelve amino acids was screened as a model peptide. Peptides library was constructed by randomly replaced non-key amino acid. Peptide-protein docking method was used to identify high affinity peptides. PEPTIDE 1-3 and model peptide were synthesized and identified the affinity to HLA-E by flow cytometer and confocal laser microscopy. At last, PEPTIDE3 (NALDEYCEDKNR) was found with the highest affinity. Taking all, HLA-E is a new treatment target, and PEPTIDE 3 is an ideal high affinity target-binding peptide candidate.

Indexed as

Histocompatibility Antigens Class IHLA-E AntigensHumansMultiple MyelomaPeptidesHistocompatibility Antigens Class IHLA-E AntigensPeptideshigh affinity target-binding peptidesHLA-Ekey membrane antigenmultiple myelomaprotein-protein interaction

Identifiers

PMID33115963
PMCPMC7655190
OpenAlexW3095354830

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.