Evidence map›Paper›PMID 33113089›Full record

ArticleBreast cancer research and treatment2021

Under-ascertainment of breast cancer susceptibility gene carriers in a cohort of New Zealand female breast cancer patients.

Vanessa Lattimore, Michael T Parsons, Amanda B Spurdle, John Pearson, Klaus Lehnert, Jan Sullivan, Caroline Lintott, Suzannah Bawden, Helen Morrin, Bridget Robinson and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Breast cancer research and treatment, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 86% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Vanessa LattimoreMackenzie Cancer Research Group, Department of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand. vanessa.lattimore@otago.ac.nz.ORCID http://orcid.org/0000-0002-5374-1035
Michael T ParsonsGenetics and Computational Biology Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.
Amanda B SpurdleGenetics and Computational Biology Division, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia.
John PearsonDepartment of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand.
Klaus LehnertCentre for Brain Research and School of Biological Sciences, The University of Auckland, Auckland, New Zealand.
Jan SullivanGenetic Health Service NZ, South Island Hub, Christchurch Hospital, Christchurch, New Zealand.
Caroline LintottGenetic Health Service NZ, South Island Hub, Christchurch Hospital, Christchurch, New Zealand.
Suzannah BawdenGenetic Health Service NZ, South Island Hub, Christchurch Hospital, Christchurch, New Zealand.
Helen MorrinMackenzie Cancer Research Group, Department of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand.
Bridget RobinsonMackenzie Cancer Research Group, Department of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand.
Logan WalkerMackenzie Cancer Research Group, Department of Pathology and Biomedical Science, University of Otago, Christchurch, New Zealand.
Christchurch Hospital · NZUniversity of Otago · NZQIMR Berghofer Medical Research Institute · AUCancer Society of New Zealand · NZUniversity of Auckland · NZ

Funding

Breast Cancer Foundation New Zealand Belinda Scott Clinical FellowshipNational Health and Medical Research Council Investigator Fellowship ID1177524Rutherford Discovery Fellowship (Royal Society of New Zealand) RDF-UOO1501
6 · The paper itself

Abstract

backgroundDiagnostic screening for pathogenic variants in breast cancer susceptibility genes, including BRCA1, BRCA2, PALB2, PTEN and TP53, may be offered to New Zealanders from suspected high-risk breast (and ovarian) cancer families. However, it is unknown how many high-risk pathogenic variant carriers in New Zealand are not offered genetic screening using existing triage tools and guidelines for breast (and ovarian) cancer patients.

methodsPanel-gene sequencing of the coding and non-coding regions of the BRCA1 and BRCA2 genes, and the coding regions and splice sites of CDH1, PALB2, PTEN and TP53, was undertaken for an unselected cohort of 367 female breast cancer patients. A total of 1685 variants were evaluated using the ENIGMA and the ACMG/AMP variant classification guidelines.

resultsOur study identified that 13 (3.5%) breast cancer patients carried a pathogenic or likely pathogenic variant in BRCA1, BRCA2, PALB2, or PTEN. A significantly higher number of pathogenic variant carriers had grade 3 tumours (10/13) when compared to non-carriers; however, no other clinicopathological characteristics were found to be significantly different between (likely) pathogenic variant carriers and non-carriers, nor between variant of unknown significance carriers and non-carriers. Notably, 46% of the identified (likely) pathogenic variant carriers had not been referred for a genetic assessment and consideration of genetic testing.

conclusionOur study shows a potential under-ascertainment of women carrying a (likely) pathogenic variant in a high-risk breast cancer susceptibility gene. These results suggest that further research into testing pathways for New Zealand breast cancer patients may be required to reduce the impact of hereditary cancer syndromes for these individuals and their families.

Indexed as

Breast NeoplasmsBRCA1 ProteinBRCA2 ProteinFemaleGenes, BRCA2Genetic Predisposition to DiseaseGenetic TestingGerm-Line MutationHeterozygoteHumansNew ZealandBRCA1 ProteinBRCA2 ProteinBreast cancerNew ZealandPanel geneVariant classification

Identifiers

PMID33113089
PMCPMC7921023
OpenAlexW3097234448

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