ArticleBioscience reports2020
Genomic characteristics and profile of microsatellite primers for Acanthogobius ommaturus by genome survey sequencing.
Article in Bioscience reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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12 citing papers in PubMed.
- The Genome Survey Analysis of Female and MaleGenes · 2025Article
- Comprehensive Whole-Genome Survey and Analysis of the Naozhou Stock of Large Yellow Croakers (Animals : an open access journal from MDPI · 2025Article
- Genomic microsatellite characterization and development of polymorphic microsatellites in Eospalax baileyi.Scientific reports · 2025Article
- Intraspecific variation in genome size in3 Biotech · 2023Article
- Whole-Genome Survey Analyses Provide a New Perspective for the Evolutionary Biology of Shimofuri Goby,Animals : an open access journal from MDPI · 2022Article
- Genomic Survey and Microsatellite Marker Investigation of Patagonian Moray Cod (Animals : an open access journal from MDPI · 2022Article
- Genome-wide survey and genetic characteristics of Ophichthus evermanni based on Illumina sequencing platform.Bioscience reports · 2022Article
- Genome survey of Misgurnus anguillicaudatus to identify genomic information, simple sequence repeat (SSR) markers, and mitochondrial genome.Molecular biology reports · 2022Article
- Article
- Comprehensive Draft Genome Analyses of Three Rockfishes (Scorpaeniformes,Current issues in molecular biology · 2021Article
- Genome-Wide Survey Reveals the Microsatellite Characteristics and Phylogenetic Relationships ofCurrent issues in molecular biology · 2021Article
- Genome survey and microsatellite motif identification of Pogonophryne albipinna.Bioscience reports · 2021Article
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5 authors.
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Abstract
Acanthogobius ommaturus is one of the suitable species to study the genetic mechanism of adaptive evolution, but there are few reports on its genetics. In the present study, the genomic survey sequencing method was used to analyze the genome characters of A. ommaturus. A total of 50.50 G high-quality sequence data were obtained in the present study. From the 19-mer distribution frequency, the estimated genome size was 928.01 Mb. The calculated sequence repeat rate was about 38.31%, the heterozygosity was approximately 0.17%, and the GC% content was approximately 40.88%. Moreover, 475,724 simple sequence repeats (SSRs) were identified. Among them, dinucleotide repeats were the most (53.70% of the total SSRs), followed by tri- (35.36%), hexa- (4.59%), tetra- (4.57%) and penta- (1.77%) nucleotide repeats type. This is the first genome-wide feature of this species to be reported.
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