Evidence map›Paper›PMID 33111116›Full record

ArticleSTAR protocols2020

Protocol for Immuno-Enrichment of FLAG-Tagged Protein Complexes.

Arielle Nicole Valdez-Sinon, Avanti Gokhale, Victor Faundez, Gary Jonathan Bassell

Open access · goldAbstract read
In one paragraph

Article in STAR protocols, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Miniprotein inhibitors of thebioRxiv : the preprint server for biology · 2026
    Article
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  3. Article
  4. AssessingPharmaceutics · 2023
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Arielle Nicole Valdez-SinonDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Avanti GokhaleDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Victor FaundezDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Gary Jonathan BassellDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Emory University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008169 · NIGMS · EMORY UNIVERSITY · PI GROSS, ROBERT E · 1987 to 2021
$20.3M
Neuronal Mechanisms of Copper Transport and ToxicityRF1AG060285 · NIA · EMORY UNIVERSITY · PI FAUNDEZ, VICTOR · 2018 to 2021
$2.4M
FMRP Mechanism and FunctionR01MH109026 · NIMH · EMORY UNIVERSITY · PI BASSELL, GARY J · 2016 to 2020
$2.0M
Synaptic Mechanisms of a Neurodevelopmental Disorder Interactome in DrosophilaR56MH111459 · NIMH · EMORY UNIVERSITY · PI FAUNDEZ, VICTOR · 2017 to 2018
$1.1M
Mechanisms of FMRP mediated translational repressionF31NS101932 · NINDS · EMORY UNIVERSITY · PI VALDEZ, ARIELLE · 2017 to 2019
$134k
NIA NIH HHS RF1 AG060285NIGMS NIH HHS T32 GM008169NIMH NIH HHS R01 MH109026NIMH NIH HHS R56 MH111459NINDS NIH HHS F31 NS101932
6 · The paper itself

Abstract

This protocol describes immunoprecipitation of proteins associated with FLAG-tagged recombinant proteins followed by mass spectrometry-based proteomics to identify the associated interactome components. FLAG epitope was chosen, because existing high-affinity monoclonal antibodies allow for sensitive immunoprecipitation and FLAG peptides permit efficient elution of protein complexes. With many commercially available FLAG tools, this protocol is highly versatile. This procedure reduces immunoprecipitation of nonspecific binding proteins. Gene ontology analyses performed following mass spectrometry-based proteomics may elucidate novel functions of proteins of interest. For complete details on the use and application of this protocol, please refer to Valdez-Sinon et al. (2020).

Indexed as

Antibodies, MonoclonalEpitopesImmunoprecipitationOligopeptidesRecombinant Fusion ProteinsRecombinant ProteinsAntibodies, MonoclonalEpitopesFLAG peptideOligopeptidesRecombinant Fusion ProteinsRecombinant Proteins

Identifiers

PMID33111116
PMCPMC7580096
OpenAlexW3048766147

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.