Evidence map›Paper›PMID 33109267›Full record

ArticleParasites & vectors2020

DjinniChip: evaluation of a novel molecular rapid diagnostic device for the detection of Chlamydia trachomatis in trachoma-endemic areas.

Tamsyn R Derrick, Natalia Sandetskaya, Harry Pickering, Andreas Kölsch, Athumani Ramadhani, Elias Mafuru, Patrick Massae, Aiweda Malisa, Tara Mtuy, Matthew J Burton and 2 more

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Trachoma.Nature reviews. Disease primers · 2022
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Tamsyn R DerrickClinical Research Department, London School of Hygiene and Tropical Medicine, London, UK.
Natalia SandetskayaDepartment of Diagnostics, Fraunhofer Institute Cell Therapy and Immunology IZI, Leipzig, Germany.
Harry PickeringClinical Research Department, London School of Hygiene and Tropical Medicine, London, UK.
Andreas KölschDepartment of Diagnostics, Fraunhofer Institute Cell Therapy and Immunology IZI, Leipzig, Germany.
Athumani RamadhaniEye Health Project, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Elias MafuruEye Health Project, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Patrick MassaeEye Health Project, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Aiweda MalisaEye Health Project, Kilimanjaro Christian Medical Centre, Moshi, Tanzania.
Tara MtuyClinical Research Department, London School of Hygiene and Tropical Medicine, London, UK.
Matthew J BurtonClinical Research Department, London School of Hygiene and Tropical Medicine, London, UK.
Martin J HollandClinical Research Department, London School of Hygiene and Tropical Medicine, London, UK. Martin.Holland@lshtm.ac.uk.ORCID http://orcid.org/0000-0002-5828-6318
Dirk KuhlmeierDepartment of Diagnostics, Fraunhofer Institute Cell Therapy and Immunology IZI, Leipzig, Germany.
London School of Hygiene & Tropical Medicine · GBKilimanjaro Christian Medical Centre · TZFraunhofer Institute for Cell Therapy and Immunology · DE

Funding

Wellcome TrustWellcome Trust 093368/Z/10/ZWellcome Trust 098481/Z/12/Z
6 · The paper itself

Abstract

backgroundThe clinical signs of active trachoma are often present in the absence of ocular Chlamydia trachomatis infection, particularly following mass drug administration. Treatment decisions following impact surveys and in post-control surveillance for communities are currently based on the prevalence of clinical signs, which may result in further unnecessary distribution of mass antibiotic treatment and the increased spread of macrolide resistance alleles in 'off-target' bacterial species. We therefore developed a simple, fast, low cost diagnostic assay (DjinniChip) for diagnosis of ocular C. trachomatis for use by trachoma control programmes.

methodsThe study was conducted in the UK, Germany and Tanzania. For clinical testing in Tanzania, specimens from a sample of 350 children between the ages of 7 to 15 years, which were part of a longitudinal cohort that began in February 2012 were selected. Two ocular swabs were taken from the right eye. The second swab was collected dry, kept cool in the field and archived at - 80 °C before sample lysis for DjinniChip detection and parallel nucleic acid purification and detection/quantification by qPCR assay.

resultsDjinniChip was able to reliably detect > 10 copies of C. trachomatis per test and correctly identified 7/10 Quality Control for Molecular Diagnostics C. trachomatis panel samples, failing to detect 3 positive samples with genome equivalent amounts ≤ 10 copies. DjinniChip performed well across a range of typical trachoma field conditions and when used by lay personnel using a series of mock samples. In the laboratory in Tanzania, using clinical samples the sensitivity and specificity of DjinniChip for C. trachomatis was 66% (95% CI 51-78) and 94.8 (95% CI 91-97%) with an overall accuracy of 90.1 (95% CI 86.4-93).

conclusionsDjinniChip performance is extremely promising, particularly its ability to detect low concentrations of C. trachomatis and its usability in field conditions. The DjinniChip requires further development to reduce inhibition and advance toward a closed system. DjinniChip results did not vary between local laboratory results and typical trachoma field settings, illustrating its potential for use in low-resource areas to prevent unnecessary rounds of MDA and to monitor for C. trachomatis recrudescence.

Indexed as

Chlamydia trachomatisAdolescentChildCohort StudiesHumansMass Drug AdministrationPathology, MolecularPrevalenceSensitivity and SpecificityTanzaniaTrachomaChlamydia trachomatisLAMPLateral flow assayRapid testTrachoma

Identifiers

PMID33109267
PMCPMC7590679
OpenAlexW3094914186

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.