Evidence map›Paper›PMID 33108475›Full record

ArticleEuropean journal of nuclear medicine and molecular imaging2021

Attenuation correction using deep Learning and integrated UTE/multi-echo Dixon sequence: evaluation in amyloid and tau PET imaging.

Kuang Gong, Paul Kyu Han, Keith A Johnson, Georges El Fakhri, Chao Ma, Quanzheng Li

Open access · greenAbstract read
In one paragraph

Article in European journal of nuclear medicine and molecular imaging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

  1. Pooled it
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  10. Novel Tracers and Radionuclides in PET Imaging.Radiologic clinics of North America · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kuang Gong *Gordon Center for Medical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114, USA.
Paul Kyu Han *Gordon Center for Medical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114, USA.
Keith A JohnsonGordon Center for Medical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114, USA.
Georges El FakhriGordon Center for Medical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114, USA.
Chao MaGordon Center for Medical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114, USA.
Quanzheng LiGordon Center for Medical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, 02114, USA. Li.Quanzheng@mgh.harvard.edu.
Gordon Center for Medical Imaging · USHarvard University · USMassachusetts General Hospital · US

Funding

Unified Joint Statistical Reconstruction of PET & MRP41EB022544 · NIBIB · YALE UNIVERSITY · PI Georges El Fakhri · 2017 to 2026
$14.8M
Disentangling the contribution of tau to aging and ADR01AG046396 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI JOHNSON, KEITH A. · 2014 to 2018
$4.0M
Study of Brain Spreading Pathways of Tau and Amyloid-Beta in (pre)clinical ADRF1AG052653 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI LI, QUANZHENG, SEPULCRE, JORGE · 2017 to 2017
$1.4M
Permeability Imaging using Simultaneous Dynamic PET and Arterial Spin Labeling MRIK01EB030045 · NIBIB · YALE UNIVERSITY · PI HAN, PAUL KYU · 2020 to 2023
$497k
Correction of Partial Volume Effects in PET for Alzheimer's Disease Using Unsupervised Deep LearningR21AG067422 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI GONG, KUANG · 2020 to 2020
$453k
Optimization of PET Image Reconstruction for Lesion DetectionR03EB030280 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI GONG, KUANG · 2020 to 2021
$184k
NIA NIH HHS R01 AG046396NIA NIH HHS R21 AG067422NIA NIH HHS RF1 AG052653NIBIB NIH HHS K01 EB030045NIBIB NIH HHS P41 EB022544NIBIB NIH HHS R03 EB030280
6 · The paper itself

Abstract

purposePET measures of amyloid and tau pathologies are powerful biomarkers for the diagnosis and monitoring of Alzheimer's disease (AD). Because cortical regions are close to bone, quantitation accuracy of amyloid and tau PET imaging can be significantly influenced by errors of attenuation correction (AC). This work presents an MR-based AC method that combines deep learning with a novel ultrashort time-to-echo (UTE)/multi-echo Dixon (mUTE) sequence for amyloid and tau imaging.

methodsThirty-five subjects that underwent both 11C-PiB and 18F-MK6240 scans were included in this study. The proposed method was compared with Dixon-based atlas method as well as magnetization-prepared rapid acquisition with gradient echo (MPRAGE)- or Dixon-based deep learning methods. The Dice coefficient and validation loss of the generated pseudo-CT images were used for comparison. PET error images regarding standardized uptake value ratio (SUVR) were quantified through regional and surface analysis to evaluate the final AC accuracy.

resultsThe Dice coefficients of the deep learning methods based on MPRAGE, Dixon, and mUTE images were 0.84 (0.91), 0.84 (0.92), and 0.87 (0.94) for the whole-brain (above-eye) bone regions, respectively, higher than the atlas method of 0.52 (0.64). The regional SUVR error for the atlas method was around 6%, higher than the regional SUV error. The regional SUV and SUVR errors for all deep learning methods were below 2%, with mUTE-based deep learning method performing the best. As for the surface analysis, the atlas method showed the largest error (> 10%) near vertices inside superior frontal, lateral occipital, superior parietal, and inferior temporal cortices. The mUTE-based deep learning method resulted in the least number of regions with error higher than 1%, with the largest error (> 5%) showing up near the inferior temporal and medial orbitofrontal cortices.

conclusionDeep learning with mUTE can generate accurate AC for amyloid and tau imaging in PET/MR.

Indexed as

Deep LearningHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingMultimodal ImagingPositron-Emission TomographyTomography, X-Ray ComputedAttenuation correctionConvolutional neural networkDeep learningPET/MRUTE/multi-echo Dixon

Identifiers

PMID33108475
PMCPMC8411350
OpenAlexW3097777103

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.