ArticleeLife2020
The S-phase-induced lncRNA
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Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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19citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
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Who cites it
19 citing papers in PubMed, 37 citations in OpenAlex.
- Investigation of the possible effects of LncRNA CYTOR on the molecular mechanisms of metastasis and Hippo signaling pathways in Triple-negative and Cisplatin-resistant breast cancer cell lines.Medical oncology (Northwood, London, England) · 2025Article
- Distinct and Additive Effects of Long Noncoding RNA-expression and Retinoic Acid-treatment During Neuronal Differentiation of Human Neuroblastoma Cells.Neurotoxicity research · 2025Article
- Impact of Poly(Lactic Acid) and Graphene Oxide Nanocomposite on Cellular Viability and Proliferation.Pharmaceutics · 2025Article
- Upregulation of the long noncoding RNA GJA9-MYCBP and PVT1 is a potential diagnostic biomarker for acute lymphoblastic leukemia.Cancer reports (Hoboken, N.J.) · 2024Article
- The crosstalk between non-coding RNAs and cell-cycle events: A new frontier in cancer therapy.Molecular therapy. Oncology · 2024Review
- The pancancer overexpressed NFYC Antisense 1 controls cell cycle mitotic progression through in cis and in trans modes of action.Cell death & disease · 2024Article
- Article
- GINS4 suppresses ferroptosis by antagonizing p53 acetylation with Snail.Proceedings of the National Academy of Sciences of the United States of America · 2023Article
- Efficient deletion of microRNAs using CRISPR/Cas9 with dual guide RNAs.Frontiers in molecular biosciences · 2023Article
- PFDN2 promotes cell cycle progression via the hnRNPD-MYBL2 axis in gastric cancer.Frontiers in oncology · 2023Article
- Long noncoding RNA LINC00239 inhibits ferroptosis in colorectal cancer by binding to Keap1 to stabilize Nrf2.Cell death & disease · 2022Article
- AggMapNet: enhanced and explainable low-sample omics deep learning with feature-aggregated multi-channel networks.Nucleic acids research · 2022Article
- TargetGeneReg 2.0: a comprehensive web-atlas for p53, p63, and cell cycle-dependent gene regulation.NAR cancer · 2022Article
- DDX5 and DDX17-multifaceted proteins in the regulation of tumorigenesis and tumor progression.Frontiers in oncology · 2022Review
- Interrogating lncRNA functions via CRISPR/Cas systems.RNA biology · 2021Review
- Long noncoding RNAs: fine-tuners hidden in the cancer signaling network.Cell death discovery · 2021Review
- Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation.Scientific reports · 2021Article
- Long non-coding RNA lnc_3712 impedes nuclear reprogramming via repressing Kdm5b.Molecular therapy. Nucleic acids · 2021Article
- RNA Helicases as Shadow Modulators of Cell Cycle Progression.International journal of molecular sciences · 2021Review
Corrections and comments
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Authors and funding
27 authors at 9 institutions in 2 countries.
Qinyu Hao *Department of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.ORCID 0000-0002-7059-7741
Xinying Zong *Department of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Qinyu SunDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Yo-Chuen LinDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
You Jin SongDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Seyedsasan HashemikhabirDepartment of BioHealth Informatics, School of Informatics and Computing, IUPUI, Indianapolis, United States.
Rosaline Yc HsuDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Mohammad KamranDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.ORCID 0000-0003-4210-672X
Ritu ChaudharyRegulatory RNAs and Cancer Section, Genetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, United States.
Vidisha TripathiDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Deepak Kumar SinghDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Arindam ChakrabortyDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.
Xiao Ling LiRegulatory RNAs and Cancer Section, Genetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, United States.
Yoon Jung KimDepartment of Biological Sciences and Center for Systems Biology, The University of Texas at Dallas, Richardson, United States.
Arturo V OrjaloLGC Biosearch Technologies, Petaluma, United States.
Maria Polycarpou-SchwarzDivision of RNA Biology and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Branden S MoriarityDepartment of Pediatrics, University of Minnesota, Minneapolis, United States.
Lisa M JenkinsCenter for Cancer Research National Cancer Institute, Bethesda, United States.
Hans E JohanssonLGC Biosearch Technologies, Petaluma, United States.
Yuelin J ZhuMolecular Genetics Section, Genetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, United States.
Sven DiederichsDivision of RNA Biology and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Anindya BagchiSanford Burnham Prebys Medical Discovery Institute, La Jolla, United States.
Tae Hoon KimDepartment of Biological Sciences and Center for Systems Biology, The University of Texas at Dallas, Richardson, United States.
Sarath C JangaDepartment of BioHealth Informatics, School of Informatics and Computing, IUPUI, Indianapolis, United States.
Ashish LalRegulatory RNAs and Cancer Section, Genetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, United States.ORCID 0000-0002-4299-8177
Supriya G PrasanthDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.ORCID 0000-0002-3735-7498
Kannanganattu V PrasanthDepartment of Cell and Developmental Biology, Cancer center at Illinois, University of Illinois at Urbana-Champaign, Urbana, United States.ORCID 0000-0003-4587-8362
University of Illinois Urbana-Champaign · USNational Cancer Institute · USBiosearch Technologies (United States) · USIndiana University – Purdue University Indianapolis · USThe University of Texas at Dallas · USGerman Cancer Research Center · DESanford Burnham Prebys Medical Discovery Institute · USUniversity of Freiburg · DEUniversity of Minnesota · US
Funding
Role of the Long Non-coding RNA PVT1 in CancerR01CA200643 · NCI · UNIVERSITY OF MINNESOTA · PI BAGCHI, ANINDYA · 2016 to 2020
$2.1MMapping RNA protein interaction networks in the human genomeR01GM123314 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI JANGA, SARATH CHANDRA · 2017 to 2021
$1.7MCharacterization of nuclear-retained RNA-mediated gene regulatory mechanismsR01GM132458 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KANNANGANATTU, PRASANTH KUMAR VIJAYAN · 2020 to 2023
$1.4MCharacterization of nuclear retained RNA-mediated gene regulatory mechanismR01GM088252 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KANNANGANATTU, PRASANTH KUMAR VIJAYAN · 2011 to 2015
$1.4MRegulation of genomic stability by ORCR01GM125196 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI PRASANTH, SUPRIYA G · 2018 to 2021
$1.3MMonoalleleic autosomal spreading of a novel family of nucleolus-localized ncRNAsR21AG065748 · NIA · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KANNANGANATTU, PRASANTH KUMAR VIJAYAN · 2020 to 2021
$423kAmerican Cancer Society RSG-11-174-01-RMCNational Science Foundation 1243372National Science Foundation 1723008National Science Foundation 1818286NCI NIH HHS R01 CA200643NIA NIH HHS AG065748NIA NIH HHS R21 AG065748NIGMS NIH HHS GM088252NIGMS NIH HHS GM123314NIGMS NIH HHS GM125196NIGMS NIH HHS R01 GM088252NIGMS NIH HHS R01 GM123314NIGMS NIH HHS R01 GM125196NIGMS NIH HHS R01 GM132458
Abstract
Cell cycle is a cellular process that is subject to stringent control. In contrast to the wealth of knowledge of proteins controlling the cell cycle, very little is known about the molecular role of lncRNAs (long noncoding RNAs) in cell-cycle progression. By performing genome-wide transcriptome analyses in cell-cycle-synchronized cells, we observed cell-cycle phase-specific induction of >2000 lncRNAs. Further, we demonstrate that an S-phase-upregulated lncRNA,
Indexed as
Gene Expression RegulationCell ProliferationCo-Repressor ProteinsCytoskeletal ProteinsDEAD-box RNA HelicasesHCT116 CellsHeLa CellsHumansRNA, Long NoncodingSignal TransductionS PhaseUp-RegulationCo-Repressor ProteinsCytoskeletal ProteinsDdx5 protein, humanDEAD-box RNA HelicasesRNA, Long NoncodingWTIP protein, humancell cyclechromosomesgene expressionHCT116human cancer cell lineslncRNAnoneU2OSWTIP
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.