Evidence map›Paper›PMID 33107116›Full record

ArticleJournal of clinical laboratory analysis2021

Analytical performance evaluation of five RT-PCR kits for severe acute respiratory syndrome coronavirus 2.

Mengmeng Wang, Dayang Chen, Wei Wu, Huamei Tang, Lijuan Kan, Zengyan Zong, Xiaowen Dou, Xiang Ji, Dan Xiong, Xiuming Zhang

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Journal of clinical laboratory analysis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.4field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

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  5. COVID-19 diagnostics: Molecular biology to nanomaterials.Clinica chimica acta; international journal of clinical chemistry · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Mengmeng WangAnhui University of Science and Technology, Huainan, China.
Dayang ChenMedical Laboratory of the Third Affiliated Hospital of ShenZhen University, Shenzhen, China.
Wei WuMedical Laboratory of the Third Affiliated Hospital of ShenZhen University, Shenzhen, China.
Huamei TangMedical Laboratory of the Third Affiliated Hospital of ShenZhen University, Shenzhen, China.
Lijuan KanMedical Laboratory of the Third Affiliated Hospital of ShenZhen University, Shenzhen, China.
Zengyan ZongAnhui University of Science and Technology, Huainan, China.ORCID https://orcid.org/0000-0003-2332-4211
Xiaowen DouMedical Laboratory of the Third Affiliated Hospital of ShenZhen University, Shenzhen, China.
Xiang JiMedical Laboratory of the Third Affiliated Hospital of ShenZhen University, Shenzhen, China.
Dan XiongAnhui University of Science and Technology, Huainan, China.
Xiuming ZhangAnhui University of Science and Technology, Huainan, China.ORCID https://orcid.org/0000-0002-7971-6444
Shenzhen Third People’s Hospital · CNAnhui University of Science and Technology · CN

Funding

National Natural Science Foundation of China 81502344National Natural Science Foundation of China 81772921Sanming Project of Medicine in Shenzhen SZSM201601062
6 · The paper itself

Abstract

backgroundWe aimed to evaluate the analytical performance of five commercial RT-PCR kits (Genekey, Daan, BioGerm, Liferiver, and Yaneng) commonly used in China, since such comparison data are lacking.

methodsA total of 20 COVID-19 confirmed patients and 30 negative nasopharyngeal swab specimens were analyzed by five kits. The detection ability of five RT-PCR kits was evaluated with 5 concentration gradients diluted by a single positive sample. The limit of detection was evaluated by N gene fragment solid standard. Two positive clinical specimens were used to evaluate the repeatability and imprecision. Finally, we used six human coronaviruses plasmid and four respiratory pathogens plasmid to check for cross-reactivity.

resultsThe positive detection rate was 100% for Genekey, Daan, and BioGerm,and 90% for Liferiver and Yaneng in 20 clinical SARS-CoV-2 infection. The coincidence rate of five kits in 10 negative samples was 100%. The detection rate of target genes for Daan, BioGerm, Liferiver, and Yaneng was 100% from Level 1 to Level 3. In Level 4, only Daan detection rate was 100%. In Level 5, five kits presented poor positive rate. The limit of detection declared by each manufacturer was verified. The repeatability for target genes was less than 5% and so did the total imprecision. There is no cross-reactivity of five kits with six human coronaviruses and four respiratory pathogens for ORF1ab and N gene.

conclusionsFive RT-PCR kits assessed in this study showed acceptable analytical performance characteristics and are useful tools for the routine diagnosis of SARS-CoV-2.

Indexed as

COVID-19 TestingHumansLimit of DetectionNasopharynxPolyproteinsReproducibility of ResultsReverse Transcriptase Polymerase Chain ReactionSARS-CoV-2Viral ProteinsORF1ab polyprotein, SARS-CoV-2PolyproteinsViral Proteinsanalytical performancedetection abilitylimit of detectionrepeatability and imprecisionRT-PCRSARS-CoV-2

Identifiers

PMID33107116
PMCPMC7645906
OpenAlexW3093529381

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.