Evidence map›Paper›PMID 33106635›Full record

ArticleNature plants2020

Equal parental contribution to the transcriptome is not equal control of embryogenesis.

Peng Zhao, Xuemei Zhou, Yifan Zheng, Yanru Ren, Meng-Xiang Sun

Abstract read
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In one paragraph

Article in Nature plants, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 37 citations in OpenAlex.

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  12. Comparative analysis of embryo proper and suspensor transcriptomes in plant embryos with different morphologies.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Peng Zhao *State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China. pzhao2000@whu.edu.cn.ORCID http://orcid.org/0000-0003-1904-8955
Xuemei Zhou *State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0003-0493-9739
Yifan ZhengState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Yanru RenState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China.
Meng-Xiang SunState Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China. mxsun@whu.edu.cn.ORCID http://orcid.org/0000-0002-6959-8405
Wuhan University · CNSouth Central Minzu University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In animals, early embryogenesis is maternally controlled, whereas in plants, parents contribute equally to the proembryo transcriptome. Thus, the question remains whether equivalent parental contribution to the transcriptome of the early proembryo means equal control of early embryogenesis. Here, on the basis of cell-lineage-specific and allele-specific transcriptome analysis, we reveal that paternal and maternal genomes contribute equally to the transcriptomes of both the apical cell lineage and the basal cell lineage of early proembryos. However, a strong maternal effect on basal cell lineage development was found, indicating that equal parental contribution to the transcriptome is not necessarily coupled with equivalent parental control of proembryonic development. Parental contributions to embryogenesis therefore cannot be concluded solely on the basis of the ratio of paternal/maternal transcripts. Furthermore, we demonstrate that parent-of-origin genes display developmental-stage-dependent and cell-lineage-dependent allelic expression patterns. These findings will facilitate the investigation of specific parental roles in specific processes of early embryogenesis.

Indexed as

AllelesArabidopsisCell LineageGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantGerminationTranscriptome

Identifiers

PMID33106635
OpenAlexW3094323581

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.