Evidence map›Paper›PMID 33106159›Full record

ArticleBMC genomics2020

Transcriptomic analysis reveals the GRAS family genes respond to gibberellin in Salvia miltiorrhiza hairy roots.

Wenrui Li, Chuangfeng Liu, Jingling Liu, Zhenqing Bai, Zongsuo Liang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Gibberellin-Induced Transcription FactorMolecules (Basel, Switzerland) · 2024
    Article
  5. Article
  6. Review
  7. Genome-Wide Identification of theInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Wenrui LiInstitute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, 712100, China.
Chuangfeng LiuCollege of Life Sciences, Northwest A&F University, Yangling, 712100, China.
Jingling LiuCollege of Life Sciences, Northwest A&F University, Yangling, 712100, China.
Zhenqing BaiCollege of Life Sciences, Northwest A&F University, Yangling, 712100, China.
Zongsuo LiangInstitute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, 712100, China. liangzs@ms.iswc.ac.cn.ORCID http://orcid.org/0000-0003-2207-7562
Northwest A&F University · CNChinese Academy of Sciences · CNZhejiang Sci-Tech University · CN

Funding

National Natural Science Foundation of China 81773835
6 · The paper itself

Abstract

backgroundSalvia miltiorrhiza is one of the most important traditional Chinese medicinal plants with high medicinal value. Gibberellins are growth-promoting phytohormones that regulate numerous growth and developmental processes in plants. However, their role on the secondary metabolism regulation has not been investigated.

resultsIn this study, we found that gibberellic acid (GA) can promote hairy roots growth and increase the contents of tanshinones and phenolic acids. Transcriptomic sequencing revealed that many genes involved in the secondary metabolism pathway were the GA-responsive. After further analysis of GA signaling pathway genes, which their expression profiles have significantly changed, it was found that the GRAS transcription factor family had a significant response to GA. We identified 35 SmGRAS genes in S. miltiorrhiza, which can be divided into 10 subfamilies. Thereafter, members of the same subfamily showed similar conserved motifs and gene structures, suggesting possible conserved functions.

conclusionsMost SmGRAS genes were significantly responsive to GA, indicating that they may play an important role in the GA signaling pathway, also participating in the GA regulation of root growth and secondary metabolism in S. miltiorrhiza.

Indexed as

GibberellinsSalvia miltiorrhizaGene Expression Regulation, PlantPlant RootsTranscriptomeGibberellinsGibberellinGRAS familySalvia miltiorrhiza hairy rootsSecondary metabolismTranscriptome

Identifiers

PMID33106159
PMCPMC7590604
OpenAlexW3094512509

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.