Evidence map›Paper›PMID 33105711›Full record

ArticleCancers2020

Comprehensive Analysis of DNA Methylation and Prediction of Response to NeoadjuvantTherapy in Locally Advanced Rectal Cancer.

Luisa Matos do Canto, Mateus Camargo Barros-Filho, Cláudia Aparecida Rainho, Diogo Marinho, Bruna Elisa Catin Kupper, Maria Dirlei Ferreira de Souza Begnami, Cristovam Scapulatempo-Neto, Birgitte Mayland Havelund, Jan Lindebjerg, Fabio Albuquerque Marchi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 8 institutions in 3 countries.

Luisa Matos do CantoDepartment of Clinical Genetics, University Hospital of Southern Denmark, 7100 Vejle, Denmark.ORCID 0000-0001-9095-9431
Mateus Camargo Barros-FilhoInternational Research Center-CIPE, A.C. Camargo Cancer Center, Sao Paulo 04002-010, Brazil.ORCID 0000-0003-3893-5269
Cláudia Aparecida RainhoDepartment of Chemical and Biological Sciences, Institute of Biosciences, Sao Paulo State University (Unesp), Botucatu 18618-689, Brazil.ORCID 0000-0002-0285-1162
Diogo MarinhoInstitute of Biological Psychiatry, Psykiatrisk Center Sct. Hans, 4000 Roskilde, Denmark.
Bruna Elisa Catin KupperColorectal Cancer Service, A.C. Camargo Cancer Center, Sao Paulo 04002-010, Brazil.
Maria Dirlei Ferreira de Souza BegnamiDepartment of Pathology, Sírio-Libanês Hospital, Sao Paulo 01308-050, Brazil.
Cristovam Scapulatempo-NetoMolecular Oncology Research Center, Barretos - 14784-400, and Diagnósticos da América (DASA), Barueri 06455010, Brazil.
Birgitte Mayland HavelundDepartment of Oncology, University Hospital of Southern Denmark, 7100 Vejle, Denmark.
Jan LindebjergDanish Colorectal Cancer Center South, 7100 Vejle, Denmark.ORCID 0000-0002-2055-4241
Fabio Albuquerque MarchiInternational Research Center-CIPE, A.C. Camargo Cancer Center, Sao Paulo 04002-010, Brazil.ORCID 0000-0001-5815-8423
Jan BaumbachTUM School of Life Sciences Weihenstephan, Technical University of Munich, 85354 Freising, Germany.
Samuel AguiarColorectal Cancer Service, A.C. Camargo Cancer Center, Sao Paulo 04002-010, Brazil.
Silvia Regina RogattoDepartment of Clinical Genetics, University Hospital of Southern Denmark, 7100 Vejle, Denmark.
AC Camargo Hospital · BRRegion of Southern Denmark · DKHospital de Câncer de Barretos · BRHospital Sírio-Libanês · BRSankt Hans Hospital · DKTechnical University of Munich · DEUniversidade Estadual Paulista (Unesp) · BRUniversity of Southern Denmark · DK

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 573589/08-9Coordenação de Aperfeiçoamento de Pessoal de Nível Superior Unesp-PrInt 001Danish Colorectal Cancer Center South #Fundação de Amparo à Pesquisa do Estado de São Paulo 2008/57887-9Fundação de Amparo à Pesquisa do Estado de São Paulo 2014/06323-9Fundação de Amparo à Pesquisa do Estado de São Paulo 2015/25803-4Research Council Lillebaelt Hospital, Denmark #
6 · The paper itself

Abstract

The treatment for locally advanced rectal carcinomas (LARC) is based on neoadjuvant chemoradiotherapy (nCRT) and surgery, which results in pathological complete response (pCR) in up to 30% of patients. Since epigenetic changes may influence response to therapy, we aimed to identify DNA methylation markers predictive of pCR in LARC patients treated with nCRT. We used high-throughput DNA methylation analysis of 32 treatment-naïve LARC biopsies and five normal rectal tissues to explore the predictive value of differentially methylated (DM) CpGs. External validation was carried out with The Cancer Genome Atlas-Rectal Adenocarcinoma (TCGA-READ 99 cases). A classifier based on three-CpGs DM (linked to

Indexed as

5-fluorouracilhigh-throughput DNA methylation analysispredictive biomarkertranslational research

Identifiers

PMID33105711
PMCPMC7690383
OpenAlexW3093566037

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.