Evidence map›Paper›PMID 33104170›Full record

ArticleThe Journal of experimental medicine2021

Multi-transcription factor reporter mice delineate early precursors to the ILC and LTi lineages.

Darshan N Kasal, Albert Bendelac

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Transcriptional network dynamics in early T cell development.The Journal of experimental medicine · 2024
    Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. ILC3: a case of conflicted identity.Frontiers in immunology · 2023
    Review
  15. Early Development of Innate Lymphoid Cells.Methods in molecular biology (Clifton, N.J.) · 2023
    Review
  16. Review
  17. Identification of aceNKPs, a committed common progenitor population of the ILC1 and NK cell continuum.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Article
  19. ILC2s - development, divergence, dispersal.Current opinion in immunology · 2022
    Review
  20. Naïve Primary Mouse CD8Frontiers in immunology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Darshan N KasalCommittee on Immunology, University of Chicago, Chicago, IL.
Albert BendelacCommittee on Immunology, University of Chicago, Chicago, IL.

Funding

INTERDISCIPLINARY TRAINING PROGRAM IN IMMUNOLOGYT32AI007090 · NIAID · UNIVERSITY OF CHICAGO · PI Peter Aidan Savage · 1985 to 2026
$11.7M
Transcriptional Regulation of Innate-Like T CellsR01AI038339 · NIAID · UNIVERSITY OF CHICAGO · PI ESTERHAZY, DARIA · 1996 to 2025
$7.6M
Transcriptional Regulation of Innate-Like T CellsR37AI038339 · NIAID · UNIVERSITY OF CHICAGO · PI BENDELAC, ALBERT S. · 2017 to 2023
$3.4M
Development of Intestinal Polyreactive IgA B CellsR01AI144094 · NIAID · UNIVERSITY OF CHICAGO · PI BENDELAC, ALBERT S. · 2019 to 2023
$2.5M
Specificity of Intestinal Immunoglobulin AU01AI125250 · NIAID · UNIVERSITY OF CHICAGO · PI BENDELAC, ALBERT S. · 2016 to 2020
$2.5M
Novel antiviral activity of interferon-gamma against viral replication complexR01AI127518 · NIAID · UNIVERSITY OF CHICAGO · PI RANDALL, GLENN C · 2017 to 2020
$1.6M
NIAID NIH HHS R01 AI038339NIAID NIH HHS R01 AI127518NIAID NIH HHS R01 AI144094NIAID NIH HHS R37 AI038339NIAID NIH HHS T32 AI007090NIAID NIH HHS U01 AI125250
6 · The paper itself

Abstract

Transcription factor (TF) reporter mice have proved integral to the characterization of murine innate lymphoid cell (ILC) development and function. Here, we implemented a CRISPR/Cas9-generated combinatorial reporter approach for the simultaneous resolution of several key TFs throughout ILC development in both the fetal liver and adult bone marrow. We demonstrate that the Tcf7-expressing early innate lymphoid precursor (EILP) and the common helper ILC precursor (CHILP) both contain a heterogeneous mixture of specified ILC and lymphoid tissue inducer (LTi) precursors with restricted lineage potential rather than a shared precursor. Moreover, the earliest specified precursor to the LTi lineage was identified upstream of these populations, before Tcf7 expression. These findings match dynamic changes in chromatin accessibility associated with the expression of key TFs (i.e., GATA3 and RORγ(t)), highlighting the distinct origins of ILC and LTi lineages at the epigenetic and functional levels, and provide a revised map for ILC development.

Indexed as

AnimalsBone MarrowCell DifferentiationCell LineageChromatinGene Expression RegulationImmunity, InnateLymphocytesLymphoid TissueMiceMice, Inbred C57BLT-Lymphocytes, Helper-InducerTranscription FactorsChromatinTranscription Factors

Identifiers

PMID33104170
PMCPMC7590509

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.